Fitness for 5 genes in Rahnella sp. WP5

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 123 experiments or choose conditions or try the comparative fitness browser

500 ntEX31_RS11175 and EX31_RS11180 are separated by 162 nucleotidesEX31_RS11180 and EX31_RS11185 are separated by 192 nucleotidesEX31_RS11185 and EX31_RS11190 are separated by 10 nucleotidesEX31_RS11190 and EX31_RS11195 are separated by 41 nucleotides EX31_RS11175: EX31_RS11175 - LysR family transcriptional regulator, at 167,760 to 168,647 _RS11175 EX31_RS11180: EX31_RS11180 - acyltransferase, at 168,810 to 170,024 _RS11180 EX31_RS11185: EX31_RS11185 - MBL fold metallo-hydrolase, at 170,217 to 171,053 _RS11185 EX31_RS11190: EX31_RS11190 - hypothetical protein, at 171,064 to 171,390 _RS11190 EX31_RS11195: EX31_RS11195 - peptidylprolyl isomerase, at 171,432 to 171,995 _RS11195
Group Condition EX31_RS11175 EX31_RS11180 EX31_RS11185 EX31_RS11190 EX31_RS11195
carbon source D,L-Lactate (C) -0.6 -0.8 -0.1 -0.6 +0.2
carbon source Sucrose (C) -0.5 -0.0 +0.0 -1.5 +0.2
carbon source NLDM_metabolites (C) -0.3 -0.2 -0.2 -1.2 +0.2
carbon source D-Mannitol (C) +0.1 -0.1 -0.7 -0.8 -0.2
carbon source NLDM_metabolites (C) -0.6 +0.3 -0.0 -0.7 -0.3
nln NLN -0.2 -0.5 +0.8 +0.1 +0.2
nln NLN -0.3 -0.3 +0.9 -0.2 +0.3
nitrogen source Ammonium chloride (N); RCH2 media; no shaking +0.2 -0.5 +0.3 +0.4 +0.6
nln NLN -0.3 -0.1 +1.1 +0.2 +0.2
nln NLN -0.3 -0.1 +0.8 +0.5 +0.3
nitrogen source L-Serine (N); RCH2 media; shaking +0.3 -0.2 +1.1 +0.2 +0.1
nln NLN -0.0 -0.4 +1.1 +0.4 +0.5
mixed community NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum -0.2 +0.1 +1.4 +0.2 +0.1
mixed community NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum +0.2 -0.2 +1.6 +0.1 +0.0
mixed community NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum +0.1 -0.2 +1.8 +0.2 -0.1
nln NLN -0.0 -0.0 +1.1 +0.2 +0.4
nitrogen source L-Serine (N); ShewMM media; shaking +0.5 -0.0 +0.9 -0.0 +0.4
mixed community NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum +0.0 +0.0 +1.4 +0.0 +0.3
mixed community NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum -0.3 +0.1 +2.2 +0.1 -0.1
mixed community NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum +0.0 +0.4 +1.6 -0.1 +0.2
nl-ccm NL-CCM +0.0 -0.2 +1.9 +0.3 +0.2
nl-ccm NL-CCM -0.1 -0.1 +2.0 +0.5 +0.2
nl-ccm NL-CCM -0.1 -0.0 +2.1 +0.2 +0.2
mixed community NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum +0.1 -0.1 +2.0 -0.0 +0.5
nl-ccm NL-CCM -0.4 +0.2 +2.3 +0.1 +0.2
mixed community NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum +0.2 -0.1 +2.0 +0.4 +0.4
mixed community NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum +0.3 +0.1 +2.0 +0.4 +0.2
mixed community NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum -0.1 +0.2 +2.2 +0.4 +0.5
nl-ccm NL-CCM +0.0 +0.1 +2.2 +0.6 +0.3
nl-ccm NL-CCM -0.1 +0.3 +2.5 +0.3 +0.5
remove
EX31_RS11175
plot		 remove
EX31_RS11180
plot		 remove
EX31_RS11185		 remove
EX31_RS11190
plot		 remove
EX31_RS11195
plot