Fitness for 5 genes in Rahnella sp. WP5

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500 ntEX31_RS11170 and EX31_RS11175 are separated by 467 nucleotidesEX31_RS11175 and EX31_RS11180 are separated by 162 nucleotidesEX31_RS11180 and EX31_RS11185 are separated by 192 nucleotidesEX31_RS11185 and EX31_RS11190 are separated by 10 nucleotides EX31_RS11170: EX31_RS11170 - bifunctional 2-methylcitrate dehydratase/aconitate hydratase, at 165,865 to 167,292 _RS11170 EX31_RS11175: EX31_RS11175 - LysR family transcriptional regulator, at 167,760 to 168,647 _RS11175 EX31_RS11180: EX31_RS11180 - acyltransferase, at 168,810 to 170,024 _RS11180 EX31_RS11185: EX31_RS11185 - MBL fold metallo-hydrolase, at 170,217 to 171,053 _RS11185 EX31_RS11190: EX31_RS11190 - hypothetical protein, at 171,064 to 171,390 _RS11190
Group Condition EX31_RS11170 EX31_RS11175 EX31_RS11180 EX31_RS11185 EX31_RS11190
carbon source D,L-Lactate (C) +0.1 -0.6 -0.8 -0.1 -0.6
carbon source Sucrose (C) +0.4 -0.5 -0.0 +0.0 -1.5
carbon source casaminos (C) -0.4 -0.3 -0.1 +0.2 -1.1
carbon source D-Mannitol (C) -0.0 +0.1 -0.1 -0.7 -0.8
nitrogen source L-Serine (N); RCH2 media; no shaking -0.9 -0.6 +0.0 +0.5 -0.5
carbon source NLDM_metabolites (C) +0.9 -0.3 -0.2 -0.2 -1.2
carbon source D-Glucose (C) +0.3 +0.1 -0.2 -0.4 -0.6
mixed community NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum -0.1 -0.2 -0.3 +1.0 -0.3
nln NLN -0.2 -0.2 -0.5 +0.8 +0.1
nln NLN -0.0 -0.3 -0.3 +0.9 -0.2
nln NLN -0.1 -0.3 -0.1 +1.1 +0.2
nln NLN -0.1 -0.3 -0.1 +0.8 +0.5
nln NLN -0.0 -0.0 -0.4 +1.1 +0.4
nitrogen source L-Serine (N); RCH2 media; shaking -0.1 +0.3 -0.2 +1.1 +0.2
nln NLN +0.3 -0.0 -0.0 +1.1 +0.2
mixed community NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum -0.3 +0.1 -0.2 +1.8 +0.2
mixed community NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum +0.0 -0.2 +0.1 +1.4 +0.2
mixed community NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum -0.1 +0.2 -0.2 +1.6 +0.1
mixed community NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum -0.3 +0.1 -0.1 +2.0 -0.0
mixed community NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum -0.0 +0.0 +0.4 +1.6 -0.1
mixed community NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum -0.2 -0.3 +0.1 +2.2 +0.1
nl-ccm NL-CCM +0.0 +0.0 -0.2 +1.9 +0.3
nl-ccm NL-CCM -0.2 -0.1 -0.0 +2.1 +0.2
nl-ccm NL-CCM +0.1 -0.1 -0.1 +2.0 +0.5
mixed community NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum -0.1 +0.2 -0.1 +2.0 +0.4
nl-ccm NL-CCM +0.1 -0.4 +0.2 +2.3 +0.1
mixed community NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum +0.1 -0.1 +0.2 +2.2 +0.4
nl-ccm NL-CCM -0.0 +0.0 +0.1 +2.2 +0.6
mixed community NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum +0.2 +0.3 +0.1 +2.0 +0.4
nl-ccm NL-CCM +0.0 -0.1 +0.3 +2.5 +0.3
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