Fitness for 5 genes in Rahnella sp. WP5

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 123 experiments or choose conditions or try the comparative fitness browser

500 ntEX31_RS10915 and EX31_RS10920 are separated by 389 nucleotidesEX31_RS10920 and EX31_RS10925 are separated by 249 nucleotidesEX31_RS10925 and EX31_RS10930 are separated by 102 nucleotidesEX31_RS10930 and EX31_RS10935 are separated by 426 nucleotides EX31_RS10915: EX31_RS10915 - glucuronyl hydrolase, at 110,742 to 111,932 _RS10915 EX31_RS10920: EX31_RS10920 - transcriptional regulator RcsA, at 112,322 to 112,936 _RS10920 EX31_RS10925: EX31_RS10925 - HAMP domain-containing protein, at 113,186 to 114,886 _RS10925 EX31_RS10930: EX31_RS10930 - protein DsrB, at 114,989 to 115,186 _RS10930 EX31_RS10935: EX31_RS10935 - transcription antiterminator/RNA stability regulator CspE, at 115,613 to 115,822 _RS10935
Group Condition EX31_RS10915 EX31_RS10920 EX31_RS10925 EX31_RS10930 EX31_RS10935
nitrogen source L-Serine (N); RCH2 media; shaking -0.2 +0.1 -0.1 -0.8 -0.3
nitrogen source L-Glutamine (N); ShewMM media; shaking +0.1 +0.1 +0.2 -1.3 -0.4
nitrogen source Ammonium chloride (N); ShewMM media; no shaking -0.2 -0.1 +0.4 -1.0 -0.3
nitrogen source L-Serine (N); ShewMM media; no shaking +0.3 -0.0 -0.1 -0.7 -0.4
mixed community NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum +0.2 -0.4 +0.1 -0.5 -0.2
mixed community NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum +0.4 +0.0 -0.1 -0.9 -0.1
nl-ccm; high oxygen NL-CCM; high oxygen +0.4 -0.6 -0.0 -0.8 +0.5
nitrogen source L-Glutamine (N); ShewMM media; no shaking -0.0 +0.5 +0.2 -0.6 -0.4
nitrogen source L-Serine (N); ShewMM media; no shaking -0.0 +0.3 +0.3 -0.5 -0.5
nitrogen source L-Glutamine (N); RCH2 media; no shaking -0.3 +0.5 +0.1 -0.5 -0.1
mixed community NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum +0.3 +0.1 +0.2 -1.0 -0.0
nitrogen source L-Serine (N); RCH2 media; shaking +0.0 +0.4 +0.2 -0.5 -0.3
nitrogen source Ammonium chloride (N); ShewMM media; shaking -0.3 +0.6 +0.2 +0.0 -0.6
nitrogen source L-Serine (N); ShewMM media; no shaking +0.2 +0.5 +0.2 -0.3 -0.6
nitrogen source L-Serine (N); ShewMM media; shaking -0.2 +0.5 -0.1 +0.2 -0.4
carbon source NLDM_metabolites (C) -0.0 +0.3 +0.3 -0.6 +0.3
nl-ccm; high oxygen NL-CCM; high oxygen +0.1 -0.1 +0.1 -0.5 +0.7
nl-ccm; ambient oxygen NL-CCM; ambient oxygen +0.2 -0.4 +0.2 -0.7 +1.2
nln NLN +0.2 -0.4 +0.2 +0.4 +0.3
nl-ccm; high oxygen NL-CCM; high oxygen +0.2 +0.5 -0.0 -0.5 +0.7
nl-ccm; ambient oxygen NL-CCM; ambient oxygen +0.2 -0.2 +0.1 -0.3 +1.2
nl-ccm; ambient oxygen NL-CCM; ambient oxygen +0.2 -0.0 +0.1 -0.4 +1.3
nf_with_fulln NF_with_fullN +0.0 -0.2 +0.4 +0.3 +0.5
carbon source D-Glucose (C) -0.1 +0.3 +0.1 +1.1 -0.1
nl-ccm; ambient oxygen NL-CCM; ambient oxygen +0.0 -0.2 +0.3 -0.2 +1.4
nl-ccm; high oxygen NL-CCM; high oxygen +0.1 +0.4 +0.1 -0.0 +0.8
nf_with10percent_fulln NF_with10percent_fullN +0.3 +0.2 -0.0 +0.3 +0.6
carbon source D-Mannitol (C) +0.2 +0.8 +0.0 +0.4 +0.1
nl-ccm; ambient oxygen NL-CCM; ambient oxygen +0.3 -0.6 +0.3 +0.1 +1.4
nl-ccm; ambient oxygen NL-CCM; ambient oxygen +0.2 +0.1 +0.1 -0.1 +1.3
remove
EX31_RS10915
plot		 remove
EX31_RS10920
plot		 remove
EX31_RS10925		 remove
EX31_RS10930
plot		 remove
EX31_RS10935
plot