Fitness for 5 genes in Rahnella sp. WP5

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500 ntEX31_RS10285 and EX31_RS10290 are separated by 2 nucleotidesEX31_RS10290 and EX31_RS10295 are separated by 36 nucleotidesEX31_RS10295 and EX31_RS10300 are separated by 122 nucleotidesEX31_RS10300 and EX31_RS10305 are separated by 0 nucleotides EX31_RS10285: EX31_RS10285 - carbohydrate ABC transporter permease, at 270,911 to 271,756 _RS10285 EX31_RS10290: EX31_RS10290 - sugar ABC transporter permease, at 271,759 to 272,739 _RS10290 EX31_RS10295: EX31_RS10295 - ABC transporter substrate-binding protein, at 272,776 to 274,041 _RS10295 EX31_RS10300: EX31_RS10300 - LysR family transcriptional regulator, at 274,164 to 275,099 _RS10300 EX31_RS10305: EX31_RS10305 - PTS transporter subunit EIIB, at 275,100 to 275,366 _RS10305
Group Condition EX31_RS10285 EX31_RS10290 EX31_RS10295 EX31_RS10300 EX31_RS10305
nitrogen source Ammonium chloride (N); RCH2 media; shaking -0.5 -0.1 +0.3 -0.4 -0.5
mixed community NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum -0.3 -0.4 -0.1 -0.3 -0.1
nitrogen source Ammonium chloride (N); ShewMM media; shaking -0.4 -0.1 +0.2 -0.2 -0.4
nitrogen source Ammonium chloride (N); ShewMM media; shaking +0.1 -0.1 -0.1 -0.3 -0.5
nitrogen source L-Serine (N); RCH2 media; shaking -0.4 -0.3 -0.1 -0.0 +0.1
nitrogen source Ammonium chloride (N); RCH2 media; no shaking -0.3 -0.1 +0.1 -0.0 -0.3
nitrogen source L-Serine (N); ShewMM media; shaking +0.0 +0.0 +0.1 +0.1 -0.7
nitrogen source L-Serine (N); RCH2 media; no shaking +0.2 -0.4 +0.3 -0.3 -0.3
nitrogen source Ammonium chloride (N); RCH2 media; shaking -0.5 +0.2 +0.3 +0.0 -0.3
nitrogen source L-Serine (N); ShewMM media; no shaking +0.2 +0.2 -0.1 -0.1 -0.6
nl-ccm; ambient oxygen NL-CCM; ambient oxygen -0.0 +0.2 -0.3 +0.1 -0.3
nitrogen source L-Serine (N); RCH2 media; shaking +0.2 +0.2 -0.1 -0.1 -0.5
nitrogen source L-Serine (N); RCH2 media; no shaking +0.1 +0.5 -0.2 +0.1 -0.6
nitrogen source Ammonium chloride (N); RCH2 media; no shaking +0.3 +0.3 +0.3 -0.2 -0.8
nitrogen source Ammonium chloride (N); ShewMM media; no shaking +0.3 +0.2 -0.3 +0.1 -0.1
carbon source D,L-Lactate (C) -0.1 +0.6 -0.4 +0.0 +0.2
mgl MGL +0.1 +0.3 +0.1 +0.2 -0.3
carbon source D-Xylose (C) -0.3 +0.6 -0.2 -0.0 +0.3
nitrogen source Ammonium chloride (N); RCH2 media; no shaking +0.2 +0.6 -0.1 -0.0 -0.2
nln NLN +0.0 +0.3 +0.2 +0.1 -0.3
mixed community NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum +0.5 +0.4 -0.1 -0.2 -0.0
carbon source D,L-Lactate (C) +0.4 +0.6 +0.1 -0.4 -0.0
mgl MGL -0.1 +0.3 -0.0 +0.4 +0.3
carbon source D-Xylose (C) +0.4 +0.9 -0.0 -0.0 -0.2
nf_with10percent_fulln NF_with10percent_fullN +0.2 +0.4 +0.1 +0.3 +0.0
carbon source casaminos (C) +0.2 +0.7 +0.0 -0.0 +0.2
carbon source NLDM_metabolites (C) +0.4 +0.5 +0.3 -0.0 -0.0
nitrogen source L-Serine (N); RCH2 media; shaking +0.0 +0.5 +0.2 +0.1 +0.3
carbon source Sucrose (C) +0.5 +0.4 +0.2 +0.1 +0.0
carbon source D-Glucose (C) +0.1 +1.1 +0.1 +0.1 +0.4
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EX31_RS10285
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