Fitness for 5 genes in Rahnella sp. WP5

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 123 experiments or choose conditions or try the comparative fitness browser

500 ntEX31_RS10000 and EX31_RS10005 are separated by 99 nucleotidesEX31_RS10005 and EX31_RS10010 are separated by 73 nucleotidesEX31_RS10010 and EX31_RS10015 are separated by 101 nucleotidesEX31_RS10015 and EX31_RS10020 are separated by 213 nucleotides EX31_RS10000: EX31_RS10000 - UPF0259 family protein, at 208,577 to 209,332 _RS10000 EX31_RS10005: EX31_RS10005 - septation protein A, at 209,432 to 209,971 _RS10005 EX31_RS10010: EX31_RS10010 - acyl-CoA thioester hydrolase YciA, at 210,045 to 210,485 _RS10010 EX31_RS10015: EX31_RS10015 - energy transducer TonB, at 210,587 to 211,318 _RS10015 EX31_RS10020: EX31_RS10020 - YciI family protein, at 211,532 to 211,828 _RS10020
Group Condition EX31_RS10000 EX31_RS10005 EX31_RS10010 EX31_RS10015 EX31_RS10020
mixed community NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum -0.5 N.D. -0.3 N.D. -1.7
carbon source D,L-Lactate (C) -0.4 N.D. +0.4 N.D. -2.1
nf_with_fulln NF_with_fullN -0.2 N.D. -0.7 N.D. -1.2
nf_with_fulln NF_with_fullN -0.1 N.D. -0.5 N.D. -1.5
nf_with_fulln NF_with_fullN -0.4 N.D. -0.6 N.D. -1.0
nitrogen source Ammonium chloride (N); RCH2 media; shaking -0.0 N.D. +0.2 N.D. -1.9
nl-ccm; high oxygen NL-CCM; high oxygen -0.2 N.D. -0.4 N.D. -1.2
nf_with_fulln NF_with_fullN -0.2 N.D. -0.4 N.D. -1.2
nitrogen source L-Serine (N); ShewMM media; no shaking -0.6 N.D. +0.2 N.D. -1.3
nf_with10percent_fulln NF_with10percent_fullN -0.3 N.D. -0.2 N.D. -1.2
nf_with10percent_fulln NF_with10percent_fullN -0.4 N.D. -0.1 N.D. -1.1
nf_with_fulln NF_with_fullN -0.3 N.D. -0.4 N.D. -0.9
nl-ccm; ambient oxygen NL-CCM; ambient oxygen -1.3 N.D. -0.0 N.D. -0.4
nf_with10percent_fulln NF_with10percent_fullN -0.4 N.D. -0.1 N.D. -1.1
carbon source casaminos (C) -0.4 N.D. -0.3 N.D. -0.8
mixed community NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum -0.6 N.D. -0.1 N.D. -0.7
nl-ccm; vial NL-CCM; vial -0.1 N.D. -0.2 N.D. -1.1
nf_with_fulln NF_with_fullN -0.5 N.D. -0.6 N.D. -0.2
mixed community NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum -0.2 N.D. +0.1 N.D. -1.0
nl-ccm; ambient oxygen NL-CCM; ambient oxygen -0.9 N.D. +0.1 N.D. -0.4
nitrogen source L-Glutamine (N); ShewMM media; no shaking +0.6 N.D. -0.2 N.D. -1.4
nl-ccm_agar NL-CCM_agar +0.0 N.D. +0.1 N.D. -1.1
mgl MGL +0.2 N.D. +0.1 N.D. -1.0
nitrogen source L-Serine (N); ShewMM media; no shaking +0.2 N.D. +0.4 N.D. -0.8
nitrogen source Ammonium chloride (N); RCH2 media; shaking +0.9 N.D. -0.1 N.D. -1.0
nitrogen source Ammonium chloride (N); RCH2 media; no shaking +0.7 N.D. -0.7 N.D. -0.1
mgl MGL -0.2 N.D. -0.4 N.D. +0.7
nitrogen source L-Serine (N); ShewMM media; shaking +0.6 N.D. +0.5 N.D. -1.0
nitrogen source L-Glutamine (N); RCH2 media; no shaking +0.8 N.D. -0.0 N.D. -0.5
carbon source Sucrose (C) -0.5 N.D. +0.5 N.D. +0.7
remove
EX31_RS10000
plot		 remove
EX31_RS10005
plot		 remove
EX31_RS10010		 remove
EX31_RS10015
plot		 remove
EX31_RS10020
plot