Fitness for 5 genes in Rahnella sp. WP5

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500 ntEX31_RS09755 and EX31_RS09760 are separated by 101 nucleotidesEX31_RS09760 and EX31_RS09765 are separated by 381 nucleotidesEX31_RS09765 and EX31_RS09770 are separated by 91 nucleotidesEX31_RS09770 and EX31_RS09775 are separated by 197 nucleotides EX31_RS09755: EX31_RS09755 - xylose ABC transporter ATP-binding protein, at 155,200 to 156,705 _RS09755 EX31_RS09760: EX31_RS09760 - D-xylose ABC transporter substrate-binding protein, at 156,807 to 157,799 _RS09760 EX31_RS09765: EX31_RS09765 - xylose isomerase, at 158,181 to 159,500 _RS09765 EX31_RS09770: EX31_RS09770 - xylulokinase, at 159,592 to 161,043 _RS09770 EX31_RS09775: EX31_RS09775 - (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase, at 161,241 to 161,531 _RS09775
Group Condition EX31_RS09755 EX31_RS09760 EX31_RS09765 EX31_RS09770 EX31_RS09775
carbon source D-Xylose (C) -1.0 -0.3 -3.5 -3.3 -2.0
carbon source D-Xylose (C) -0.6 +0.2 -3.2 -3.3 -0.9
nitrogen source L-Serine (N); ShewMM media; no shaking -0.6 -0.2 -0.4 +0.1 -2.5
carbon source Sucrose (C) -0.2 -0.2 +0.1 +0.1 -2.3
nitrogen source L-Glutamine (N); ShewMM media; shaking +0.2 -0.5 -0.0 +0.1 -2.1
nitrogen source L-Glutamine (N); RCH2 media; no shaking -0.3 -0.7 +0.2 -0.2 -1.3
nln NLN +0.1 -0.6 -0.3 +0.1 -1.5
nitrogen source Ammonium chloride (N); ShewMM media; no shaking -0.1 -0.2 -0.5 +0.1 -1.5
carbon source casaminos (C) -0.8 +0.6 -0.2 +0.0 -1.7
nitrogen source L-Glutamine (N); RCH2 media; shaking +0.2 -0.1 +0.0 -0.4 -1.9
nitrogen source Ammonium chloride (N); RCH2 media; shaking -0.1 -0.0 -0.2 -0.1 -1.7
nitrogen source L-Glutamine (N); ShewMM media; shaking -0.1 -0.1 -0.1 -0.4 -1.2
nitrogen source L-Glutamine (N); ShewMM media; shaking -0.2 +0.0 +0.1 -0.0 -1.8
nitrogen source L-Serine (N); RCH2 media; shaking -0.2 +0.1 -0.3 +0.1 -1.3
carbon source casaminos (C) +0.5 -0.1 +0.1 +0.1 -2.1
nitrogen source Ammonium chloride (N); ShewMM media; no shaking -0.3 -0.5 +0.1 -0.1 -0.8
carbon source D-Mannitol (C) +0.2 -0.2 -0.1 -0.2 -1.1
nitrogen source L-Serine (N); ShewMM media; shaking -0.1 -0.7 +0.1 +0.2 -0.7
nitrogen source L-Glutamine (N); RCH2 media; no shaking +0.2 -0.5 -0.1 +0.1 -1.0
nitrogen source L-Serine (N); RCH2 media; no shaking -0.4 -0.5 -0.4 -0.4 +0.5
carbon source D,L-Lactate (C) +0.3 -0.7 -0.4 +0.2 -0.2
mgl MGL -0.1 -0.8 -0.0 -0.4 +0.7
nf_with10percent_fulln NF_with10percent_fullN -0.1 -0.9 -0.3 -0.1 +0.9
nitrogen source Ammonium chloride (N); ShewMM media; shaking -1.0 +0.3 -0.0 -0.1 +0.5
nf_with_fulln NF_with_fullN +0.2 -0.6 -0.1 -0.2 +0.6
nitrogen source Ammonium chloride (N); RCH2 media; no shaking -0.3 -0.5 +0.0 -0.2 +0.9
nf_with_fulln NF_with_fullN -0.1 -0.5 -0.2 +0.1 +0.9
nf_with10percent_fulln NF_with10percent_fullN +0.3 -0.4 -0.2 +0.1 +1.0
nf_with_fulln NF_with_fullN +0.3 -0.2 -0.1 -0.1 +1.1
mgl MGL -0.0 -0.2 +0.0 +0.3 +1.2
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EX31_RS09755
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EX31_RS09760
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EX31_RS09770
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EX31_RS09775
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