Fitness for 5 genes in Rahnella sp. WP5

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500 ntEX31_RS09455 and EX31_RS09460 are separated by 375 nucleotidesEX31_RS09460 and EX31_RS09465 are separated by 14 nucleotidesEX31_RS09465 and EX31_RS09470 overlap by 26 nucleotidesEX31_RS09470 and EX31_RS09475 are separated by 212 nucleotides EX31_RS09455: EX31_RS09455 - FliC/FljB family flagellin, at 100,344 to 101,624 _RS09455 EX31_RS09460: EX31_RS09460 - flagellar filament capping protein FliD, at 102,000 to 103,436 _RS09460 EX31_RS09465: EX31_RS09465 - flagellar export chaperone FliS, at 103,451 to 103,888 _RS09465 EX31_RS09470: EX31_RS09470 - flagella biosynthesis regulatory protein FliT, at 103,863 to 104,225 _RS09470 EX31_RS09475: EX31_RS09475 - AraC family transcriptional regulator, at 104,438 to 105,292 _RS09475
Group Condition EX31_RS09455 EX31_RS09460 EX31_RS09465 EX31_RS09470 EX31_RS09475
nitrogen source Ammonium chloride (N); RCH2 media; no shaking -0.5 -1.6 -1.2 -1.8 -0.4
nitrogen source Ammonium chloride (N); RCH2 media; no shaking -0.6 -1.1 -1.1 -0.7 -0.7
nitrogen source L-Glutamine (N); RCH2 media; no shaking -0.9 -1.4 -1.8 -0.3 +0.2
nitrogen source L-Glutamine (N); ShewMM media; no shaking -1.0 -1.1 -0.7 -0.8 -0.5
carbon source Sucrose (C) +0.5 -0.9 -1.0 -1.6 -0.8
nitrogen source L-Glutamine (N); ShewMM media; no shaking -0.7 -0.8 -1.4 -0.7 -0.2
carbon source D-Mannitol (C) +0.2 -0.8 -1.3 -1.4 -0.5
nitrogen source L-Glutamine (N); ShewMM media; no shaking -0.8 -0.8 -0.6 -1.1 -0.5
nitrogen source L-Glutamine (N); RCH2 media; no shaking -0.7 -0.9 -1.6 -0.6 +0.1
nitrogen source L-Glutamine (N); RCH2 media; no shaking -0.7 -1.3 -1.5 -0.2 +0.3
carbon source D-Mannitol (C) +0.5 -0.5 -0.9 -1.9 -0.3
nitrogen source Ammonium chloride (N); RCH2 media; no shaking +0.2 -1.0 -0.8 -1.6 +0.4
carbon source Sucrose (C) +0.6 -0.3 -0.8 -1.5 -0.7
carbon source D-Glucose (C) +0.3 -0.5 -0.4 -1.7 -0.4
nitrogen source Ammonium chloride (N); ShewMM media; no shaking -0.4 -0.6 -0.4 -1.2 +0.2
nitrogen source Ammonium chloride (N); ShewMM media; shaking +0.1 -0.8 -0.2 -0.5 -0.5
carbon source D-Xylose (C) +0.2 -0.5 -0.6 -0.9 -0.0
nitrogen source Ammonium chloride (N); RCH2 media; shaking +0.2 -0.7 -0.3 -0.5 -0.7
nitrogen source Ammonium chloride (N); ShewMM media; shaking +0.2 -1.1 -0.2 -0.7 -0.0
nitrogen source Ammonium chloride (N); RCH2 media; shaking +0.4 -0.9 -0.1 -0.8 -0.1
nitrogen source L-Glutamine (N); RCH2 media; shaking +0.2 -0.3 -0.3 -1.1 +0.3
nitrogen source L-Glutamine (N); RCH2 media; shaking +0.6 -0.5 +0.1 -1.2 -0.1
carbon source D,L-Lactate (C) +0.2 +0.0 -0.6 -0.9 +0.3
carbon source D-Xylose (C) +0.4 -0.4 -0.4 -0.6 +0.0
nitrogen source Ammonium chloride (N); RCH2 media; shaking +0.6 -0.6 -0.1 -0.9 -0.1
nitrogen source L-Glutamine (N); ShewMM media; shaking +0.4 -0.3 -0.7 -0.4 +0.2
nitrogen source L-Serine (N); RCH2 media; no shaking +0.7 -0.2 -0.6 -0.6 +0.0
carbon source casaminos (C) +0.0 +0.2 -0.4 -0.8 +0.4
carbon source NLDM_metabolites (C) +0.6 -0.2 +0.2 -0.8 -0.2
carbon source NLDM_metabolites (C) +0.4 +0.1 -0.2 +0.7 +1.4
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EX31_RS09455
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EX31_RS09460
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EX31_RS09475
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