Fitness for 5 genes in Rahnella sp. WP5

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500 ntEX31_RS09435 and EX31_RS09440 are separated by 135 nucleotidesEX31_RS09440 and EX31_RS09445 are separated by 188 nucleotidesEX31_RS09445 and EX31_RS09450 are separated by 54 nucleotidesEX31_RS09450 and EX31_RS09455 are separated by 308 nucleotides EX31_RS09435: EX31_RS09435 - cystine ABC transporter substrate-binding protein, at 96,617 to 97,417 _RS09435 EX31_RS09440: EX31_RS09440 - D-cysteine desulfhydrase, at 97,553 to 98,563 _RS09440 EX31_RS09445: EX31_RS09445 - flagella biosynthesis regulatory protein FliZ, at 98,752 to 99,258 _RS09445 EX31_RS09450: EX31_RS09450 - RNA polymerase sigma factor FliA, at 99,313 to 100,035 _RS09450 EX31_RS09455: EX31_RS09455 - FliC/FljB family flagellin, at 100,344 to 101,624 _RS09455
Group Condition EX31_RS09435 EX31_RS09440 EX31_RS09445 EX31_RS09450 EX31_RS09455
nitrogen source L-Glutamine (N); ShewMM media; no shaking -0.3 -0.3 +0.0 -1.0 -1.0
nitrogen source L-Glutamine (N); ShewMM media; no shaking -0.1 -0.7 -0.1 -0.8 -0.8
nitrogen source L-Glutamine (N); RCH2 media; no shaking +0.3 -0.3 -0.1 -1.2 -0.9
nitrogen source L-Glutamine (N); RCH2 media; no shaking -0.1 -0.1 -0.3 -1.1 -0.7
nitrogen source L-Glutamine (N); ShewMM media; no shaking +0.0 -0.1 -0.0 -1.2 -0.7
nitrogen source Ammonium chloride (N); RCH2 media; no shaking +0.1 +0.0 +0.1 -1.5 -0.6
nitrogen source Ammonium chloride (N); RCH2 media; no shaking +0.2 -0.2 -0.2 -1.2 -0.5
nitrogen source L-Glutamine (N); RCH2 media; no shaking +0.3 -0.2 -0.2 -1.1 -0.7
nitrogen source Ammonium chloride (N); ShewMM media; no shaking -0.4 -0.1 +0.1 -0.8 -0.4
nitrogen source Ammonium chloride (N); RCH2 media; shaking -0.3 -0.6 -0.6 -0.2 +0.2
nitrogen source Ammonium chloride (N); RCH2 media; no shaking -0.1 -0.0 +0.0 -1.4 +0.2
nitrogen source Ammonium chloride (N); ShewMM media; shaking -0.1 -0.2 -0.4 -0.4 +0.1
nitrogen source L-Glutamine (N); RCH2 media; shaking -0.3 +0.2 -0.3 -0.2 +0.2
nitrogen source L-Glutamine (N); ShewMM media; shaking +0.1 -0.4 -0.3 +0.0 +0.3
nitrogen source Ammonium chloride (N); RCH2 media; shaking +0.1 -0.4 -0.3 -0.1 +0.4
nitrogen source L-Serine (N); ShewMM media; no shaking -0.2 -0.1 -0.4 +0.1 +0.4
nitrogen source L-Serine (N); RCH2 media; no shaking -0.4 +0.0 -0.5 +0.3 +0.4
nitrogen source L-Glutamine (N); ShewMM media; shaking +0.1 -0.4 -0.0 -0.2 +0.4
nitrogen source L-Serine (N); RCH2 media; no shaking -0.1 -0.4 -0.4 +0.3 +0.5
carbon source D,L-Lactate (C) +0.2 -0.5 +0.6 -0.1 +0.2
nitrogen source L-Glutamine (N); RCH2 media; shaking +0.4 -0.1 -0.1 -0.1 +0.6
carbon source D-Mannitol (C) +0.3 -0.6 +0.4 +0.1 +0.5
carbon source Sucrose (C) +0.3 +0.1 +0.1 -0.3 +0.6
nitrogen source L-Serine (N); RCH2 media; no shaking +0.2 +0.1 -0.4 +0.4 +0.7
nitrogen source L-Serine (N); ShewMM media; no shaking +0.1 +0.2 -0.3 +0.5 +0.6
carbon source D-Glucose (C) +0.4 +0.0 +0.2 +0.2 +0.3
nf_with10percent_fulln NF_with10percent_fullN +0.5 +0.1 +0.2 +0.4 +0.1
carbon source NLDM_metabolites (C) +0.3 -0.1 +0.2 +0.3 +0.6
nitrogen source L-Serine (N); ShewMM media; no shaking +0.1 +0.2 -0.2 +0.5 +0.8
carbon source NLDM_metabolites (C) -0.1 +0.7 +0.3 +0.3 +0.4
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