Fitness for 4 genes in Rahnella sp. WP5

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500 ntEX31_RS09055 and EX31_RS09060 are separated by 16 nucleotidesEX31_RS09060 and EX31_RS09065 are separated by 38 nucleotidesEX31_RS09065 and EX31_RS24950 are separated by 76 nucleotides EX31_RS09055: EX31_RS09055 - hypothetical protein, at 1 to 778 _RS09055 EX31_RS09060: EX31_RS09060 - fimbrial biogenesis outer membrane usher protein, at 795 to 3,449 _RS09060 EX31_RS09065: EX31_RS09065 - molecular chaperone, at 3,488 to 4,162 _RS09065 EX31_RS24950: EX31_RS24950 - type 1 fimbrial protein, at 4,239 to 4,778 _RS24950
Group Condition EX31_RS09055 EX31_RS09060 EX31_RS09065 EX31_RS24950
nl-ccm; high oxygen NL-CCM; high oxygen N.D. +0.0 -1.3 N.D.
carbon source casaminos (C) N.D. -0.1 -1.1 N.D.
mgl MGL N.D. -0.1 -1.1 N.D.
nln NLN N.D. -0.2 -1.0 N.D.
nln NLN N.D. -0.1 -1.1 N.D.
mgl MGL N.D. +0.2 -1.2 N.D.
nl-ccm; high oxygen NL-CCM; high oxygen N.D. -0.0 -0.9 N.D.
nf_with_fulln NF_with_fullN N.D. +0.0 -1.0 N.D.
nl-ccm; high oxygen NL-CCM; high oxygen N.D. -0.1 -0.9 N.D.
nl-ccm; ambient oxygen NL-CCM; ambient oxygen N.D. -0.2 -0.8 N.D.
nln NLN N.D. +0.0 -0.9 N.D.
nl-ccm; ambient oxygen NL-CCM; ambient oxygen N.D. +0.0 -0.8 N.D.
carbon source D-Glucose (C) N.D. +0.0 -0.8 N.D.
mixed community NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum N.D. -0.2 -0.6 N.D.
nf_with_fulln NF_with_fullN N.D. -0.0 -0.7 N.D.
nf_with_fulln NF_with_fullN N.D. -0.0 -0.6 N.D.
nitrogen source Ammonium chloride (N); ShewMM media; shaking N.D. -0.2 -0.4 N.D.
nl-ccm; low oxygen NL-CCM; low oxygen N.D. +0.1 -0.7 N.D.
nl-ccm; high oxygen NL-CCM; high oxygen N.D. +0.0 -0.6 N.D.
nl-ccm; ambient oxygen NL-CCM; ambient oxygen N.D. +0.1 -0.6 N.D.
carbon source D-Mannitol (C) N.D. +0.2 -0.5 N.D.
nitrogen source L-Glutamine (N); RCH2 media; no shaking N.D. +0.2 -0.5 N.D.
carbon source D-Mannitol (C) N.D. +0.3 -0.5 N.D.
carbon source D-Xylose (C) N.D. +0.3 -0.5 N.D.
nitrogen source Ammonium chloride (N); RCH2 media; no shaking N.D. +0.3 -0.4 N.D.
nitrogen source Ammonium chloride (N); RCH2 media; shaking N.D. +0.1 +0.5 N.D.
nl-ccm; vial NL-CCM; vial N.D. -0.0 +0.6 N.D.
carbon source D,L-Lactate (C) N.D. +0.2 +0.5 N.D.
nitrogen source L-Glutamine (N); RCH2 media; no shaking N.D. +0.3 +0.4 N.D.
nitrogen source Ammonium chloride (N); RCH2 media; shaking N.D. +0.4 +0.7 N.D.
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