Fitness for 5 genes in Rahnella sp. WP5

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 123 experiments or choose conditions or try the comparative fitness browser

500 ntEX31_RS09015 and EX31_RS09020 are separated by 27 nucleotidesEX31_RS09020 and EX31_RS09025 are separated by 9 nucleotidesEX31_RS09025 and EX31_RS09030 are separated by 46 nucleotidesEX31_RS09030 and EX31_RS09035 are separated by 101 nucleotides EX31_RS09015: EX31_RS09015 - helix-turn-helix transcriptional regulator, at 316,134 to 316,406 _RS09015 EX31_RS09020: EX31_RS09020 - fimbrial protein, at 316,434 to 317,405 _RS09020 EX31_RS09025: EX31_RS09025 - molecular chaperone, at 317,415 to 318,152 _RS09025 EX31_RS09030: EX31_RS09030 - fimbria/pilus outer membrane usher protein, at 318,199 to 320,700 _RS09030 EX31_RS09035: EX31_RS09035 - fimbrial protein, at 320,802 to 321,380 _RS09035
Group Condition EX31_RS09015 EX31_RS09020 EX31_RS09025 EX31_RS09030 EX31_RS09035
nitrogen source L-Serine (N); ShewMM media; no shaking -0.4 -0.5 -0.3 -0.2 -0.5
mixed community NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum -0.3 -0.4 -0.3 -0.3 -0.2
mixed community NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum -0.4 -0.3 -0.2 -0.3 -0.2
nitrogen source L-Serine (N); ShewMM media; no shaking -0.5 -0.3 -0.2 -0.3 -0.2
mixed community NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum -0.1 -0.4 -0.3 -0.4 -0.2
nitrogen source L-Serine (N); RCH2 media; no shaking -0.3 -0.3 -0.1 -0.2 -0.4
nitrogen source L-Serine (N); RCH2 media; no shaking -0.2 -0.4 -0.3 -0.2 -0.2
mgl MGL +0.2 -0.3 -0.2 -0.3 +0.3
nl-ccm; ambient oxygen NL-CCM; ambient oxygen +0.2 +0.2 -0.0 +0.1 +0.7
nln NLN +0.2 +0.2 +0.2 +0.0 +0.5
nl-ccm; ambient oxygen NL-CCM; ambient oxygen +0.1 +0.3 +0.1 +0.1 +0.5
nf_with_fulln NF_with_fullN +0.3 +0.3 +0.1 +0.0 +0.4
nl-ccm; ambient oxygen NL-CCM; ambient oxygen +0.1 +0.1 +0.1 +0.1 +0.7
nln NLN +0.2 +0.3 +0.1 +0.1 +0.5
nf_with10percent_fulln NF_with10percent_fullN +0.3 +0.2 +0.1 +0.1 +0.4
nl-ccm; high oxygen NL-CCM; high oxygen +0.3 +0.2 +0.1 +0.2 +0.4
nl-ccm; high oxygen NL-CCM; high oxygen +0.4 +0.1 +0.2 +0.2 +0.5
nl-ccm; high oxygen NL-CCM; high oxygen +0.3 +0.3 +0.1 +0.2 +0.5
nf_with10percent_fulln NF_with10percent_fullN +0.4 +0.3 +0.1 +0.2 +0.4
carbon source NLDM_metabolites (C) +0.4 +0.6 -0.3 +0.1 +0.6
nf_with10percent_fulln NF_with10percent_fullN +0.3 +0.3 +0.2 +0.1 +0.5
nf_with10percent_fulln NF_with10percent_fullN +0.2 +0.3 +0.2 +0.2 +0.6
nf_with10percent_fulln NF_with10percent_fullN +0.3 +0.3 +0.2 +0.2 +0.4
nl-ccm; ambient oxygen NL-CCM; ambient oxygen +0.1 +0.3 +0.2 +0.2 +0.8
nitrogen source L-Glutamine (N); ShewMM media; no shaking +0.3 +0.3 +0.2 +0.3 +0.5
nitrogen source L-Glutamine (N); ShewMM media; no shaking +0.5 +0.4 +0.2 +0.2 +0.3
nitrogen source L-Glutamine (N); RCH2 media; no shaking +0.6 +0.3 +0.2 +0.4 +0.7
nitrogen source L-Glutamine (N); ShewMM media; no shaking +0.8 +0.2 +0.3 +0.2 +0.6
nitrogen source L-Glutamine (N); RCH2 media; no shaking +0.6 +0.5 +0.2 +0.3 +0.6
nitrogen source L-Glutamine (N); RCH2 media; no shaking +0.8 +0.2 +0.4 +0.3 +0.7
remove
EX31_RS09015
plot		 remove
EX31_RS09020
plot		 remove
EX31_RS09025		 remove
EX31_RS09030
plot		 remove
EX31_RS09035
plot