Fitness for 5 genes in Rahnella sp. WP5

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500 ntEX31_RS08735 and EX31_RS08740 are separated by 255 nucleotidesEX31_RS08740 and EX31_RS08745 are separated by 87 nucleotidesEX31_RS08745 and EX31_RS08750 are separated by 39 nucleotidesEX31_RS08750 and EX31_RS25265 are separated by 4 nucleotides EX31_RS08735: EX31_RS08735 - peptidylprolyl isomerase, at 257,225 to 257,845 _RS08735 EX31_RS08740: EX31_RS08740 - opacity-associated protein OapA, at 258,101 to 258,811 _RS08740 EX31_RS08745: EX31_RS08745 - 50S ribosomal protein L9, at 258,899 to 259,351 _RS08745 EX31_RS08750: EX31_RS08750 - 30S ribosomal protein S18, at 259,391 to 259,618 _RS08750 EX31_RS25265: EX31_RS25265 - primosomal replication protein N, at 259,623 to 259,940 _RS25265
Group Condition EX31_RS08735 EX31_RS08740 EX31_RS08745 EX31_RS08750 EX31_RS25265
nitrogen source L-Glutamine (N); RCH2 media; shaking -0.1 -0.1 -4.4 N.D. N.D.
nitrogen source L-Glutamine (N); ShewMM media; shaking -0.1 -0.1 -4.4 N.D. N.D.
nitrogen source Ammonium chloride (N); ShewMM media; shaking -0.2 +0.1 -4.3 N.D. N.D.
nitrogen source L-Glutamine (N); ShewMM media; no shaking -0.2 -0.1 -4.2 N.D. N.D.
nitrogen source L-Serine (N); RCH2 media; no shaking -0.1 +0.0 -4.3 N.D. N.D.
nitrogen source L-Glutamine (N); RCH2 media; no shaking -0.0 +0.0 -4.4 N.D. N.D.
nitrogen source Ammonium chloride (N); ShewMM media; shaking -0.1 +0.1 -4.2 N.D. N.D.
nitrogen source L-Serine (N); RCH2 media; shaking -0.0 +0.0 -4.3 N.D. N.D.
nitrogen source L-Glutamine (N); RCH2 media; shaking -0.1 +0.1 -4.3 N.D. N.D.
nl-ccm NL-CCM -0.1 -0.0 -4.1 N.D. N.D.
mixed community NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum -0.2 +0.1 -4.1 N.D. N.D.
mgl MGL +0.0 -0.1 -4.0 N.D. N.D.
mgl MGL -0.1 +0.0 -3.8 N.D. N.D.
nitrogen source L-Glutamine (N); RCH2 media; no shaking -0.1 -0.1 -3.4 N.D. N.D.
nitrogen source L-Serine (N); RCH2 media; no shaking -0.1 -0.2 -3.2 N.D. N.D.
nitrogen source L-Glutamine (N); ShewMM media; shaking -0.1 -0.0 -3.4 N.D. N.D.
nitrogen source L-Serine (N); ShewMM media; shaking -0.2 +0.0 -3.3 N.D. N.D.
nitrogen source L-Serine (N); ShewMM media; shaking -0.2 +0.1 -3.3 N.D. N.D.
carbon source NLDM_metabolites (C) -0.2 -0.1 -3.1 N.D. N.D.
nitrogen source L-Serine (N); RCH2 media; shaking -0.2 +0.1 -3.3 N.D. N.D.
nitrogen source L-Serine (N); RCH2 media; shaking -0.1 -0.1 -3.2 N.D. N.D.
carbon source Sucrose (C) -0.1 -0.1 -3.1 N.D. N.D.
nitrogen source Ammonium chloride (N); ShewMM media; no shaking +0.0 -0.1 -3.3 N.D. N.D.
nitrogen source Ammonium chloride (N); RCH2 media; no shaking -0.1 +0.1 -3.2 N.D. N.D.
carbon source NLDM_metabolites (C) -0.1 +0.0 -2.8 N.D. N.D.
nitrogen source L-Glutamine (N); ShewMM media; no shaking -0.1 -0.1 -2.7 N.D. N.D.
carbon source D-Glucose (C) -0.2 +0.0 -2.6 N.D. N.D.
carbon source D-Mannitol (C) -0.2 +0.1 -2.7 N.D. N.D.
nln NLN -0.1 +0.1 -2.7 N.D. N.D.
nf_with_fulln NF_with_fullN -0.2 +0.3 -2.6 N.D. N.D.
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EX31_RS08735
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EX31_RS08740
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EX31_RS25265
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