Fitness for 5 genes in Rahnella sp. WP5

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500 ntEX31_RS08525 and EX31_RS08530 are separated by 122 nucleotidesEX31_RS08530 and EX31_RS08535 overlap by 1 nucleotidesEX31_RS08535 and EX31_RS08540 are separated by 79 nucleotidesEX31_RS08540 and EX31_RS08545 are separated by 24 nucleotides EX31_RS08525: EX31_RS08525 - 30S ribosomal protein S15, at 212,556 to 212,825 _RS08525 EX31_RS08530: EX31_RS08530 - tRNA pseudouridine(55) synthase TruB, at 212,948 to 213,892 _RS08530 EX31_RS08535: EX31_RS08535 - 30S ribosome-binding factor RbfA, at 213,892 to 214,305 _RS08535 EX31_RS08540: EX31_RS08540 - translation initiation factor IF-2, at 214,385 to 217,078 _RS08540 EX31_RS08545: EX31_RS08545 - transcription termination/antitermination protein NusA, at 217,103 to 218,611 _RS08545
Group Condition EX31_RS08525 EX31_RS08530 EX31_RS08535 EX31_RS08540 EX31_RS08545
nitrogen source L-Serine (N); RCH2 media; shaking N.D. -0.3 -2.9 N.D. -0.9
nitrogen source L-Serine (N); ShewMM media; shaking N.D. -0.2 -2.9 N.D. -0.8
nitrogen source Ammonium chloride (N); RCH2 media; no shaking N.D. -0.2 -3.0 N.D. -0.6
nitrogen source L-Glutamine (N); ShewMM media; no shaking N.D. -0.2 -3.2 N.D. -0.4
nitrogen source L-Serine (N); RCH2 media; shaking N.D. -0.2 -2.1 N.D. -1.3
nitrogen source L-Serine (N); RCH2 media; no shaking N.D. -0.1 -2.5 N.D. -1.0
nitrogen source Ammonium chloride (N); RCH2 media; shaking N.D. -0.3 -2.8 N.D. -0.3
nitrogen source L-Serine (N); RCH2 media; no shaking N.D. -0.3 -1.9 N.D. -1.1
nitrogen source L-Glutamine (N); RCH2 media; no shaking N.D. -0.1 -2.4 N.D. -0.7
nitrogen source L-Serine (N); ShewMM media; no shaking N.D. -0.0 -2.0 N.D. -1.0
nitrogen source Ammonium chloride (N); RCH2 media; shaking N.D. -0.1 -2.2 N.D. -0.7
nitrogen source Ammonium chloride (N); RCH2 media; no shaking N.D. -0.3 -2.2 N.D. -0.3
nitrogen source Ammonium chloride (N); ShewMM media; shaking N.D. +0.1 -2.3 N.D. -0.6
carbon source Sucrose (C) N.D. -0.0 -2.6 N.D. -0.1
nitrogen source L-Serine (N); ShewMM media; shaking N.D. -0.0 -1.7 N.D. -0.9
nitrogen source Ammonium chloride (N); RCH2 media; shaking N.D. -0.2 -1.9 N.D. -0.4
carbon source casaminos (C) N.D. -0.1 -1.4 N.D. -1.0
nitrogen source L-Glutamine (N); RCH2 media; no shaking N.D. -0.1 -2.1 N.D. -0.3
nitrogen source Ammonium chloride (N); RCH2 media; no shaking N.D. -0.2 -2.2 N.D. -0.1
carbon source NLDM_metabolites (C) N.D. -0.2 -1.6 N.D. -0.7
nitrogen source L-Glutamine (N); ShewMM media; no shaking N.D. -0.2 -1.7 N.D. -0.5
nitrogen source L-Glutamine (N); RCH2 media; no shaking N.D. -0.1 -1.9 N.D. -0.1
mgl MGL N.D. -0.2 -1.4 N.D. -0.5
nitrogen source Ammonium chloride (N); ShewMM media; no shaking N.D. -0.1 -1.7 N.D. -0.3
nitrogen source L-Glutamine (N); ShewMM media; shaking N.D. +0.0 -1.9 N.D. -0.2
nitrogen source L-Serine (N); RCH2 media; shaking N.D. -0.2 -1.3 N.D. -0.5
nitrogen source L-Serine (N); ShewMM media; shaking N.D. -0.2 -0.9 N.D. -0.7
carbon source NLDM_metabolites (C) N.D. +0.0 -0.7 N.D. -1.2
nitrogen source Ammonium chloride (N); ShewMM media; no shaking N.D. -0.3 -1.5 N.D. +0.1
nl-ccm; ambient oxygen NL-CCM; ambient oxygen N.D. +0.9 +0.0 N.D. +1.0
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