Fitness for 5 genes in Rahnella sp. WP5

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500 ntEX31_RS08305 and EX31_RS08310 are separated by 268 nucleotidesEX31_RS08310 and EX31_RS08315 are separated by 9 nucleotidesEX31_RS08315 and EX31_RS08320 are separated by 322 nucleotidesEX31_RS08320 and EX31_RS08325 are separated by 252 nucleotides EX31_RS08305: EX31_RS08305 - maltose ABC transporter permease MalG, at 156,478 to 157,368 _RS08305 EX31_RS08310: EX31_RS08310 - 4-alpha-glucanotransferase, at 157,637 to 159,724 _RS08310 EX31_RS08315: EX31_RS08315 - maltodextrin phosphorylase, at 159,734 to 162,136 _RS08315 EX31_RS08320: EX31_RS08320 - HTH-type transcriptional regulator MalT, at 162,459 to 165,185 _RS08320 EX31_RS08325: EX31_RS08325 - membrane protein, at 165,438 to 165,722 _RS08325
Group Condition EX31_RS08305 EX31_RS08310 EX31_RS08315 EX31_RS08320 EX31_RS08325
mgl MGL +0.1 -0.0 -0.0 -0.0 -0.3
carbon source NLDM_metabolites (C) -0.1 +0.1 +0.1 +0.0 -0.4
carbon source D-Mannitol (C) -0.1 +0.1 -0.0 +0.0 -0.2
mixed community NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum +0.1 +0.0 +0.0 -0.0 -0.3
carbon source casaminos (C) -0.1 -0.3 +0.0 +0.2 -0.1
nitrogen source Ammonium chloride (N); RCH2 media; no shaking -0.0 -0.1 +0.1 +0.1 -0.3
nl-ccm_agar NL-CCM_agar +0.1 -0.0 +0.0 +0.0 -0.4
nitrogen source L-Glutamine (N); RCH2 media; shaking -0.0 +0.0 +0.1 +0.1 -0.4
carbon source D-Xylose (C) -0.3 -0.1 +0.0 +0.2 +0.1
mgl MGL +0.0 +0.1 +0.1 -0.0 -0.2
nitrogen source L-Glutamine (N); RCH2 media; shaking +0.0 -0.1 +0.1 +0.2 -0.3
nl-ccm; high oxygen NL-CCM; high oxygen +0.1 +0.0 +0.1 +0.1 -0.3
carbon source casaminos (C) +0.1 -0.3 -0.0 +0.1 +0.2
nitrogen source Ammonium chloride (N); ShewMM media; shaking -0.2 -0.0 +0.2 +0.1 -0.0
nitrogen source Ammonium chloride (N); RCH2 media; shaking +0.0 -0.0 +0.1 +0.2 -0.2
nitrogen source L-Glutamine (N); ShewMM media; shaking +0.1 +0.0 +0.1 +0.1 -0.3
carbon source D-Glucose (C) -0.0 +0.1 +0.1 +0.1 -0.2
nitrogen source L-Glutamine (N); RCH2 media; no shaking -0.0 +0.2 +0.1 +0.2 -0.2
nitrogen source L-Serine (N); ShewMM media; shaking -0.1 +0.0 +0.0 +0.2 +0.1
nitrogen source L-Serine (N); RCH2 media; shaking +0.1 +0.1 +0.2 +0.1 -0.2
nitrogen source Ammonium chloride (N); RCH2 media; no shaking +0.0 -0.1 +0.1 +0.2 +0.1
carbon source D,L-Lactate (C) -0.1 +0.0 +0.0 +0.1 +0.2
nitrogen source L-Glutamine (N); ShewMM media; no shaking -0.0 -0.1 +0.1 +0.2 +0.2
carbon source D-Mannitol (C) -0.1 +0.1 +0.1 +0.1 +0.1
nitrogen source L-Serine (N); RCH2 media; no shaking -0.1 -0.0 +0.1 +0.1 +0.3
nitrogen source L-Serine (N); ShewMM media; no shaking +0.1 -0.0 +0.1 +0.1 +0.1
nitrogen source L-Glutamine (N); ShewMM media; shaking +0.1 -0.1 +0.2 +0.1 +0.1
nitrogen source L-Glutamine (N); RCH2 media; no shaking +0.0 +0.1 +0.1 +0.1 +0.1
carbon source D,L-Lactate (C) +0.1 +0.1 +0.1 +0.0 +0.2
carbon source D-Xylose (C) +0.1 +0.1 +0.1 +0.2 +0.0
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