Fitness for 5 genes in Rahnella sp. WP5

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500 ntEX31_RS08170 and EX31_RS08175 are separated by 107 nucleotidesEX31_RS08175 and EX31_RS08180 are separated by 180 nucleotidesEX31_RS08180 and EX31_RS08185 are separated by 315 nucleotidesEX31_RS08185 and EX31_RS08190 are separated by 135 nucleotides EX31_RS08170: EX31_RS08170 - bifunctional dihydroneopterin aldolase/7,8-dihydroneopterin epimerase, at 128,046 to 128,402 _RS08170 EX31_RS08175: EX31_RS08175 - glycerol-3-phosphate 1-O-acyltransferase PlsY, at 128,510 to 129,139 _RS08175 EX31_RS08180: EX31_RS08180 - tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD, at 129,320 to 130,333 _RS08180 EX31_RS08185: EX31_RS08185 - 30S ribosomal protein S21, at 130,649 to 130,864 _RS08185 EX31_RS08190: EX31_RS08190 - DNA primase, at 131,000 to 132,748 _RS08190
Group Condition EX31_RS08170 EX31_RS08175 EX31_RS08180 EX31_RS08185 EX31_RS08190
mixed community NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum N.D. -0.2 N.D. N.D. N.D.
nitrogen source Ammonium chloride (N); ShewMM media; shaking N.D. -0.2 N.D. N.D. N.D.
mixed community NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum N.D. -0.2 N.D. N.D. N.D.
mixed community NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum N.D. -0.2 N.D. N.D. N.D.
mixed community NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum N.D. -0.2 N.D. N.D. N.D.
nitrogen source Ammonium chloride (N); ShewMM media; no shaking N.D. -0.2 N.D. N.D. N.D.
nl-ccm NL-CCM N.D. -0.2 N.D. N.D. N.D.
mixed community NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum N.D. -0.2 N.D. N.D. N.D.
nl-ccm NL-CCM N.D. -0.2 N.D. N.D. N.D.
nf_with_fulln NF_with_fullN N.D. +0.2 N.D. N.D. N.D.
nf_with_fulln NF_with_fullN N.D. +0.2 N.D. N.D. N.D.
nitrogen source L-Glutamine (N); RCH2 media; no shaking N.D. +0.2 N.D. N.D. N.D.
nln NLN N.D. +0.2 N.D. N.D. N.D.
nln NLN N.D. +0.2 N.D. N.D. N.D.
nl-ccm_agar NL-CCM_agar N.D. +0.2 N.D. N.D. N.D.
nl-ccm; ambient oxygen NL-CCM; ambient oxygen N.D. +0.2 N.D. N.D. N.D.
nln NLN N.D. +0.2 N.D. N.D. N.D.
nl-ccm; high oxygen NL-CCM; high oxygen N.D. +0.2 N.D. N.D. N.D.
nf_with_fulln NF_with_fullN N.D. +0.2 N.D. N.D. N.D.
carbon source D,L-Lactate (C) N.D. +0.2 N.D. N.D. N.D.
carbon source NLDM_metabolites (C) N.D. +0.2 N.D. N.D. N.D.
nitrogen source Ammonium chloride (N); RCH2 media; no shaking N.D. +0.2 N.D. N.D. N.D.
nf_with10percent_fulln NF_with10percent_fullN N.D. +0.2 N.D. N.D. N.D.
nf_with_fulln NF_with_fullN N.D. +0.3 N.D. N.D. N.D.
nf_with10percent_fulln NF_with10percent_fullN N.D. +0.3 N.D. N.D. N.D.
carbon source D,L-Lactate (C) N.D. +0.3 N.D. N.D. N.D.
nf_with10percent_fulln NF_with10percent_fullN N.D. +0.3 N.D. N.D. N.D.
nf_with10percent_fulln NF_with10percent_fullN N.D. +0.3 N.D. N.D. N.D.
nf_with10percent_fulln NF_with10percent_fullN N.D. +0.4 N.D. N.D. N.D.
nf_with10percent_fulln NF_with10percent_fullN N.D. +0.4 N.D. N.D. N.D.
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EX31_RS08170
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EX31_RS08175
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EX31_RS08190
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