Fitness for 5 genes in Rahnella sp. WP5

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500 ntEX31_RS07695 and EX31_RS07700 overlap by 4 nucleotidesEX31_RS07700 and EX31_RS07705 are separated by 2 nucleotidesEX31_RS07705 and EX31_RS25245 are separated by 64 nucleotidesEX31_RS25245 and EX31_RS07710 are separated by 93 nucleotides EX31_RS07695: EX31_RS07695 - phage tail tape measure protein, at 21,754 to 23,385 _RS07695 EX31_RS07700: EX31_RS07700 - phage tail protein, at 23,382 to 23,852 _RS07700 EX31_RS07705: EX31_RS07705 - tail protein, at 23,855 to 24,955 _RS07705 EX31_RS25245: EX31_RS25245 - late control protein B, at 25,020 to 25,199 _RS25245 EX31_RS07710: EX31_RS07710 - 50S ribosomal protein L19, at 25,293 to 25,640 _RS07710
Group Condition EX31_RS07695 EX31_RS07700 EX31_RS07705 EX31_RS25245 EX31_RS07710
nl-ccm; low oxygen NL-CCM; low oxygen -0.3 -0.2 -0.0 -0.5 N.D.
nl-ccm; ambient oxygen NL-CCM; ambient oxygen -0.3 +0.0 +0.0 -0.6 N.D.
nl-ccm; ambient oxygen NL-CCM; ambient oxygen -0.1 -0.1 -0.0 -0.5 N.D.
nf_with10percent_fulln NF_with10percent_fullN -0.0 -0.0 +0.0 -0.7 N.D.
nl-ccm; ambient oxygen NL-CCM; ambient oxygen -0.1 -0.1 -0.1 -0.4 N.D.
nl-ccm; high oxygen NL-CCM; high oxygen -0.1 +0.1 -0.1 -0.5 N.D.
nl-ccm; ambient oxygen NL-CCM; ambient oxygen -0.1 +0.1 -0.2 -0.5 N.D.
nf_with10percent_fulln NF_with10percent_fullN -0.1 +0.0 -0.1 -0.5 N.D.
nl-ccm; low oxygen NL-CCM; low oxygen -0.1 +0.0 +0.1 -0.5 N.D.
mixed community NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum +0.1 -0.1 +0.1 -0.5 N.D.
nf_with_fulln NF_with_fullN +0.0 +0.1 +0.1 -0.6 N.D.
nf_with_fulln NF_with_fullN +0.0 +0.1 +0.1 -0.6 N.D.
nln NLN +0.1 +0.1 +0.2 -0.7 N.D.
nitrogen source L-Glutamine (N); ShewMM media; shaking +0.3 -0.0 -0.1 -0.4 N.D.
nitrogen source L-Serine (N); RCH2 media; shaking +0.1 +0.2 -0.0 -0.4 N.D.
carbon source Sucrose (C) +0.1 +0.2 +0.1 -0.3 N.D.
carbon source D,L-Lactate (C) -0.0 -0.2 +0.2 +0.4 N.D.
nitrogen source Ammonium chloride (N); ShewMM media; shaking +0.3 +0.2 +0.1 -0.2 N.D.
nitrogen source L-Serine (N); RCH2 media; no shaking +0.2 -0.1 +0.2 +0.3 N.D.
carbon source casaminos (C) +0.3 +0.2 +0.6 -0.4 N.D.
carbon source D-Mannitol (C) +0.1 +0.2 -0.1 +0.6 N.D.
nitrogen source L-Serine (N); ShewMM media; shaking +0.1 +0.1 +0.2 +0.3 N.D.
carbon source NLDM_metabolites (C) +0.1 +0.1 +0.1 +0.5 N.D.
nitrogen source L-Serine (N); RCH2 media; no shaking +0.3 +0.2 +0.0 +0.6 N.D.
carbon source Sucrose (C) +0.1 +0.1 +0.2 +0.7 N.D.
carbon source D-Glucose (C) +0.3 +0.1 +0.2 +0.5 N.D.
carbon source casaminos (C) +0.4 +0.0 +0.0 +0.8 N.D.
carbon source D-Xylose (C) +0.3 +0.2 +0.2 +0.6 N.D.
carbon source D-Xylose (C) +0.4 +0.2 +0.1 +0.8 N.D.
carbon source NLDM_metabolites (C) +0.5 +0.2 -0.1 +0.9 N.D.
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EX31_RS07695
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EX31_RS07700
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EX31_RS07710
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