Fitness for 5 genes in Rahnella sp. WP5

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500 ntEX31_RS07250 and EX31_RS07255 are separated by 83 nucleotidesEX31_RS07255 and EX31_RS07260 are separated by 209 nucleotidesEX31_RS07260 and EX31_RS07265 are separated by 418 nucleotidesEX31_RS07265 and EX31_RS07270 are separated by 40 nucleotides EX31_RS07250: EX31_RS07250 - ABC transporter ATP-binding protein, at 249,912 to 250,685 _RS07250 EX31_RS07255: EX31_RS07255 - serine hydrolase, at 250,769 to 252,322 _RS07255 EX31_RS07260: EX31_RS07260 - formate-dependent uric acid utilization protein AegA, at 252,532 to 254,511 _RS07260 EX31_RS07265: EX31_RS07265 - heme-binding protein, at 254,930 to 255,406 _RS07265 EX31_RS07270: EX31_RS07270 - gluconate 5-dehydrogenase, at 255,447 to 256,013 _RS07270
Group Condition EX31_RS07250 EX31_RS07255 EX31_RS07260 EX31_RS07265 EX31_RS07270
nitrogen source L-Serine (N); RCH2 media; no shaking -1.1 -1.2 +0.2 N.D. -0.1
carbon source NLDM_metabolites (C) +0.3 -1.7 -0.2 N.D. -0.1
nitrogen source Ammonium chloride (N); ShewMM media; shaking -0.9 +0.1 +0.0 N.D. -0.4
nitrogen source L-Glutamine (N); RCH2 media; shaking -0.4 -0.2 -0.1 N.D. -0.4
nitrogen source Ammonium chloride (N); RCH2 media; no shaking -0.1 -0.8 -0.1 N.D. +0.0
nitrogen source L-Glutamine (N); ShewMM media; no shaking +0.1 -0.4 -0.1 N.D. -0.3
mgl MGL +0.2 -0.5 +0.0 N.D. -0.4
nitrogen source L-Glutamine (N); RCH2 media; shaking -0.5 -0.4 +0.2 N.D. +0.1
nitrogen source Ammonium chloride (N); RCH2 media; shaking -0.7 +0.1 +0.2 N.D. -0.1
nitrogen source Ammonium chloride (N); ShewMM media; no shaking +0.2 -0.4 -0.3 N.D. -0.1
nitrogen source Ammonium chloride (N); ShewMM media; no shaking +0.1 -0.5 +0.2 N.D. -0.3
carbon source casaminos (C) +0.3 -0.9 -0.3 N.D. +0.3
nf_with_fulln NF_with_fullN -0.3 +0.2 -0.2 N.D. -0.1
nitrogen source Ammonium chloride (N); ShewMM media; shaking -0.1 -0.6 +0.2 N.D. +0.2
nitrogen source L-Glutamine (N); ShewMM media; shaking +0.4 -0.6 -0.1 N.D. -0.0
nitrogen source L-Glutamine (N); ShewMM media; no shaking -0.0 -0.7 +0.2 N.D. +0.2
nitrogen source L-Serine (N); ShewMM media; shaking +0.3 -0.5 -0.1 N.D. +0.1
carbon source D,L-Lactate (C) +0.6 -0.5 -0.1 N.D. -0.1
nitrogen source Ammonium chloride (N); ShewMM media; shaking +0.3 -0.4 -0.1 N.D. +0.3
carbon source Sucrose (C) +0.5 -0.6 -0.2 N.D. +0.3
nitrogen source L-Serine (N); RCH2 media; shaking +0.3 -0.4 +0.1 N.D. +0.2
mixed community NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum +0.1 +0.4 -0.2 N.D. -0.2
carbon source D-Xylose (C) +0.4 -0.4 +0.1 N.D. +0.1
mgl MGL -0.3 +0.3 -0.1 N.D. +0.3
nitrogen source L-Serine (N); ShewMM media; no shaking +0.3 -0.4 +0.2 N.D. +0.3
carbon source D-Xylose (C) +0.5 -0.2 +0.2 N.D. +0.3
nl-ccm; vial NL-CCM; vial +0.2 +0.5 -0.0 N.D. +0.3
nl-ccm; low oxygen NL-CCM; low oxygen +0.4 +0.3 +0.1 N.D. +0.2
nl-ccm NL-CCM +0.3 +0.5 -0.0 N.D. +0.2
carbon source casaminos (C) +0.7 +0.0 -0.1 N.D. +0.5
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EX31_RS07250
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EX31_RS07255
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EX31_RS07265
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EX31_RS07270
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