Fitness for 5 genes in Rahnella sp. WP5

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500 ntEX31_RS05995 and EX31_RS06000 are separated by 112 nucleotidesEX31_RS06000 and EX31_RS06005 are separated by 71 nucleotidesEX31_RS06005 and EX31_RS06010 are separated by 100 nucleotidesEX31_RS06010 and EX31_RS06015 are separated by 75 nucleotides EX31_RS05995: EX31_RS05995 - membrane protein insertase YidC, at 358,279 to 359,913 _RS05995 EX31_RS06000: EX31_RS06000 - tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE, at 360,026 to 361,390 _RS06000 EX31_RS06005: EX31_RS06005 - short chain dehydrogenase, at 361,462 to 362,061 _RS06005 EX31_RS06010: EX31_RS06010 - LysR family transcriptional regulator, at 362,162 to 363,049 _RS06010 EX31_RS06015: EX31_RS06015 - methyl-accepting chemotaxis protein, at 363,125 to 365,020 _RS06015
Group Condition EX31_RS05995 EX31_RS06000 EX31_RS06005 EX31_RS06010 EX31_RS06015
mgl MGL N.D. -2.8 -0.1 +0.1 +0.1
carbon source NLDM_metabolites (C) N.D. -1.9 -0.0 -0.5 +0.1
nitrogen source L-Glutamine (N); ShewMM media; no shaking N.D. -2.1 -0.0 -0.0 -0.1
carbon source D-Xylose (C) N.D. -2.0 -0.0 -0.0 -0.1
carbon source Sucrose (C) N.D. -1.9 -0.1 -0.2 +0.0
carbon source D-Xylose (C) N.D. -1.8 -0.0 -0.2 -0.1
nitrogen source Ammonium chloride (N); ShewMM media; shaking N.D. -1.5 -0.2 -0.2 -0.1
nitrogen source L-Glutamine (N); RCH2 media; no shaking N.D. -1.8 -0.1 -0.3 +0.2
nitrogen source L-Glutamine (N); RCH2 media; shaking N.D. -1.7 +0.1 -0.1 -0.1
nitrogen source Ammonium chloride (N); RCH2 media; shaking N.D. -1.4 -0.1 -0.2 -0.1
nitrogen source Ammonium chloride (N); ShewMM media; no shaking N.D. -1.2 -0.3 -0.3 +0.1
mgl MGL N.D. -1.9 -0.0 +0.3 -0.1
mgl MGL N.D. -1.7 +0.1 -0.1 -0.0
nitrogen source L-Glutamine (N); ShewMM media; shaking N.D. -1.3 -0.2 -0.2 -0.0
carbon source D,L-Lactate (C) N.D. -1.3 -0.1 -0.1 -0.1
mgl MGL N.D. -1.9 +0.1 +0.2 +0.1
nitrogen source L-Serine (N); RCH2 media; no shaking N.D. -1.3 -0.1 -0.1 -0.1
nitrogen source L-Serine (N); ShewMM media; shaking N.D. -1.4 -0.0 -0.1 +0.0
nitrogen source L-Serine (N); ShewMM media; no shaking N.D. -1.1 -0.1 -0.0 -0.2
carbon source Sucrose (C) N.D. -1.2 +0.0 -0.1 -0.1
nitrogen source Ammonium chloride (N); RCH2 media; no shaking N.D. -1.2 +0.1 -0.2 -0.1
nitrogen source Ammonium chloride (N); ShewMM media; no shaking N.D. -1.4 +0.1 +0.0 -0.2
nitrogen source L-Glutamine (N); ShewMM media; no shaking N.D. -1.3 +0.0 -0.1 +0.1
nitrogen source Ammonium chloride (N); RCH2 media; shaking N.D. -1.1 -0.2 -0.1 +0.1
nitrogen source L-Serine (N); RCH2 media; shaking N.D. -1.4 +0.0 +0.1 -0.1
nitrogen source Ammonium chloride (N); ShewMM media; shaking N.D. -1.2 -0.0 -0.2 +0.1
nitrogen source Ammonium chloride (N); RCH2 media; no shaking N.D. -1.2 -0.1 -0.1 +0.2
nitrogen source Ammonium chloride (N); RCH2 media; no shaking N.D. -1.4 +0.1 -0.0 +0.1
mgl MGL N.D. -1.3 +0.0 +0.1 +0.1
nf_with_fulln NF_with_fullN N.D. -1.2 +0.2 +0.1 +0.0
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EX31_RS05995
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EX31_RS06000
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EX31_RS06015
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