Fitness for 5 genes in Rahnella sp. WP5

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500 ntEX31_RS25175 and EX31_RS25180 overlap by 37 nucleotidesEX31_RS25180 and EX31_RS05995 are separated by 2 nucleotidesEX31_RS05995 and EX31_RS06000 are separated by 112 nucleotidesEX31_RS06000 and EX31_RS06005 are separated by 71 nucleotides EX31_RS25175: EX31_RS25175 - ribonuclease P protein component, at 357,696 to 358,055 _RS25175 EX31_RS25180: EX31_RS25180 - membrane protein insertion efficiency factor YidD, at 358,019 to 358,276 _RS25180 EX31_RS05995: EX31_RS05995 - membrane protein insertase YidC, at 358,279 to 359,913 _RS05995 EX31_RS06000: EX31_RS06000 - tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE, at 360,026 to 361,390 _RS06000 EX31_RS06005: EX31_RS06005 - short chain dehydrogenase, at 361,462 to 362,061 _RS06005
Group Condition EX31_RS25175 EX31_RS25180 EX31_RS05995 EX31_RS06000 EX31_RS06005
mgl MGL N.D. -0.0 N.D. -2.8 -0.1
carbon source NLDM_metabolites (C) N.D. -0.6 N.D. -1.9 -0.0
mgl MGL N.D. -0.4 N.D. -1.9 -0.0
carbon source D-Xylose (C) N.D. -0.0 N.D. -2.0 -0.0
nitrogen source L-Glutamine (N); ShewMM media; no shaking N.D. +0.2 N.D. -2.1 -0.0
carbon source Sucrose (C) N.D. +0.1 N.D. -1.9 -0.1
nitrogen source L-Serine (N); RCH2 media; no shaking N.D. -0.5 N.D. -1.3 -0.1
carbon source D-Xylose (C) N.D. -0.1 N.D. -1.8 -0.0
mgl MGL N.D. +0.1 N.D. -1.9 +0.1
nitrogen source L-Glutamine (N); RCH2 media; no shaking N.D. +0.1 N.D. -1.8 -0.1
nitrogen source Ammonium chloride (N); ShewMM media; no shaking N.D. -0.2 N.D. -1.2 -0.3
nitrogen source Ammonium chloride (N); ShewMM media; no shaking N.D. -0.4 N.D. -1.4 +0.1
nitrogen source L-Glutamine (N); RCH2 media; shaking N.D. -0.1 N.D. -1.7 +0.1
nitrogen source L-Serine (N); RCH2 media; shaking N.D. -0.3 N.D. -1.4 +0.0
carbon source D,L-Lactate (C) N.D. -0.1 N.D. -1.3 -0.1
nitrogen source Ammonium chloride (N); ShewMM media; shaking N.D. +0.1 N.D. -1.5 -0.2
nitrogen source Ammonium chloride (N); RCH2 media; shaking N.D. -0.3 N.D. -1.1 -0.2
nitrogen source L-Serine (N); ShewMM media; shaking N.D. -0.2 N.D. -1.4 -0.0
carbon source Sucrose (C) N.D. -0.3 N.D. -1.2 +0.0
nitrogen source Ammonium chloride (N); RCH2 media; shaking N.D. -0.0 N.D. -1.4 -0.1
mgl MGL N.D. +0.2 N.D. -1.7 +0.1
nitrogen source L-Serine (N); RCH2 media; no shaking N.D. -0.5 N.D. -0.7 -0.2
nitrogen source Ammonium chloride (N); RCH2 media; no shaking N.D. -0.1 N.D. -1.4 +0.1
nitrogen source L-Glutamine (N); ShewMM media; shaking N.D. +0.0 N.D. -1.3 -0.2
nitrogen source L-Glutamine (N); ShewMM media; no shaking N.D. -0.1 N.D. -1.3 +0.0
nf_with_fulln NF_with_fullN N.D. -0.3 N.D. -1.2 +0.1
nitrogen source L-Glutamine (N); RCH2 media; no shaking N.D. -0.1 N.D. -1.3 +0.1
nf_with_fulln NF_with_fullN N.D. -0.1 N.D. -1.2 +0.2
nitrogen source Ammonium chloride (N); RCH2 media; no shaking N.D. +0.1 N.D. -1.2 +0.1
nitrogen source L-Glutamine (N); ShewMM media; shaking N.D. +0.3 N.D. -1.2 -0.1
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EX31_RS25175
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EX31_RS25180
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EX31_RS06000
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EX31_RS06005
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