Fitness for 5 genes in Rahnella sp. WP5

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 123 experiments or choose conditions or try the comparative fitness browser

500 ntEX31_RS05350 and EX31_RS05355 are separated by 92 nucleotidesEX31_RS05355 and EX31_RS05365 are separated by 376 nucleotidesEX31_RS05365 and EX31_RS05370 are separated by 306 nucleotidesEX31_RS05370 and EX31_RS05375 overlap by 4 nucleotides EX31_RS05350: EX31_RS05350 - amino acid permease, at 213,260 to 214,759 _RS05350 EX31_RS05355: EX31_RS05355 - malate dehydrogenase (quinone), at 214,852 to 216,504 _RS05355 EX31_RS05365: EX31_RS05365 - malate:quinone oxidoreductase, at 216,881 to 218,530 _RS05365 EX31_RS05370: EX31_RS05370 - anti-sigma factor, at 218,837 to 219,613 _RS05370 EX31_RS05375: EX31_RS05375 - sigma-70 family RNA polymerase sigma factor, at 219,610 to 220,128 _RS05375
Group Condition EX31_RS05350 EX31_RS05355 EX31_RS05365 EX31_RS05370 EX31_RS05375
nf_with_fulln NF_with_fullN -0.1 -0.6 -0.1 -0.1 +0.1
nf_with_fulln NF_with_fullN -0.0 -0.6 -0.0 -0.1 +0.1
nf_with_fulln NF_with_fullN -0.1 -0.6 +0.1 -0.2 +0.1
nf_with_fulln NF_with_fullN -0.1 -0.6 +0.0 -0.1 +0.1
nf_with_fulln NF_with_fullN -0.0 -0.5 +0.1 -0.1 +0.1
nf_with_fulln NF_with_fullN -0.0 -0.5 +0.1 -0.1 +0.1
nitrogen source Ammonium chloride (N); ShewMM media; no shaking -0.0 -0.5 +0.2 -0.1 +0.1
nitrogen source L-Glutamine (N); RCH2 media; no shaking +0.0 -0.4 -0.1 +0.2 +0.1
nf_with10percent_fulln NF_with10percent_fullN -0.0 -0.4 +0.0 +0.1 +0.1
nitrogen source Ammonium chloride (N); RCH2 media; no shaking +0.0 -0.5 +0.1 +0.0 +0.1
carbon source Sucrose (C) +0.1 -0.2 -0.1 +0.1 -0.1
carbon source casaminos (C) +0.1 -0.4 +0.1 -0.1 +0.2
carbon source D-Mannitol (C) +0.0 -0.4 +0.0 +0.3 -0.1
carbon source NLDM_metabolites (C) +0.1 -0.2 -0.3 +0.0 +0.2
nitrogen source L-Glutamine (N); RCH2 media; no shaking -0.0 -0.4 +0.0 +0.1 +0.1
nitrogen source Ammonium chloride (N); ShewMM media; shaking +0.0 -0.3 +0.1 +0.1 -0.0
nitrogen source L-Glutamine (N); RCH2 media; shaking -0.1 -0.3 +0.1 +0.1 +0.1
nitrogen source Ammonium chloride (N); RCH2 media; no shaking +0.2 -0.3 +0.1 +0.2 +0.0
nf_with10percent_fulln NF_with10percent_fullN -0.0 -0.3 +0.1 +0.1 +0.2
nf_with10percent_fulln NF_with10percent_fullN -0.0 -0.2 +0.1 +0.2 +0.1
nl-ccm; high oxygen NL-CCM; high oxygen -0.1 -0.1 -0.0 +0.3 +0.1
carbon source D,L-Lactate (C) +0.0 +0.2 +0.0 +0.3 -0.2
carbon source D-Xylose (C) +0.0 +0.1 -0.1 +0.3 +0.2
carbon source D-Xylose (C) +0.0 -0.0 +0.1 +0.4 +0.2
nl-ccm; ambient oxygen NL-CCM; ambient oxygen -0.0 +0.1 +0.0 +0.6 +0.1
nl-ccm; ambient oxygen NL-CCM; ambient oxygen +0.0 +0.1 -0.1 +0.7 +0.1
nl-ccm; ambient oxygen NL-CCM; ambient oxygen -0.1 +0.2 +0.0 +0.7 +0.1
nl-ccm; ambient oxygen NL-CCM; ambient oxygen -0.0 +0.2 -0.0 +0.8 +0.1
nl-ccm; ambient oxygen NL-CCM; ambient oxygen -0.1 +0.1 +0.1 +0.8 +0.2
nl-ccm; ambient oxygen NL-CCM; ambient oxygen +0.0 +0.5 -0.0 +0.8 +0.1
remove
EX31_RS05350
plot		 remove
EX31_RS05355
plot		 remove
EX31_RS05365		 remove
EX31_RS05370
plot		 remove
EX31_RS05375
plot