Fitness for 5 genes in Rahnella sp. WP5

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500 ntEX31_RS05120 and EX31_RS05125 overlap by 4 nucleotidesEX31_RS05125 and EX31_RS05130 are separated by 156 nucleotidesEX31_RS05130 and EX31_RS05135 are separated by 41 nucleotidesEX31_RS05135 and EX31_RS05140 are separated by 139 nucleotides EX31_RS05120: EX31_RS05120 - serine hydrolase, at 160,335 to 161,585 _RS05120 EX31_RS05125: EX31_RS05125 - hypothetical protein, at 161,582 to 161,824 _RS05125 EX31_RS05130: EX31_RS05130 - HAMP domain-containing protein, at 161,981 to 163,636 _RS05130 EX31_RS05135: EX31_RS05135 - hypothetical protein, at 163,678 to 163,986 _RS05135 EX31_RS05140: EX31_RS05140 - NAD(P)/FAD-dependent oxidoreductase, at 164,126 to 165,328 _RS05140
Group Condition EX31_RS05120 EX31_RS05125 EX31_RS05130 EX31_RS05135 EX31_RS05140
mixed community NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum -0.0 -0.6 -0.2 -0.1 +0.0
nl-ccm; ambient oxygen NL-CCM; ambient oxygen -0.2 -0.4 -0.1 -0.1 -0.0
nitrogen source Ammonium chloride (N); RCH2 media; shaking -0.1 -0.3 -0.0 -0.1 -0.2
nl-ccm; high oxygen NL-CCM; high oxygen -0.1 -0.4 -0.1 -0.1 -0.0
carbon source NLDM_metabolites (C) -0.3 -0.5 +0.2 +0.1 -0.1
mixed community NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum +0.0 -0.3 -0.3 -0.0 -0.1
mixed community NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum +0.1 -0.4 -0.1 -0.0 -0.3
nln NLN -0.1 -0.4 -0.1 +0.0 -0.1
nitrogen source L-Glutamine (N); RCH2 media; no shaking -0.0 -0.4 -0.1 -0.1 +0.0
nf_with_fulln NF_with_fullN -0.0 -0.6 -0.2 +0.1 +0.1
nf_with_fulln NF_with_fullN -0.1 -0.5 -0.1 +0.1 +0.0
nln NLN -0.0 -0.4 -0.1 -0.1 -0.0
nl-ccm; ambient oxygen NL-CCM; ambient oxygen -0.1 -0.3 -0.2 +0.0 +0.0
carbon source D-Xylose (C) -0.1 -0.3 -0.1 -0.1 -0.1
mgl MGL +0.1 -0.5 -0.0 -0.1 -0.0
nln NLN -0.1 -0.4 -0.1 -0.0 +0.1
carbon source Sucrose (C) -0.1 -0.4 -0.0 +0.1 -0.0
nitrogen source Ammonium chloride (N); ShewMM media; shaking +0.1 -0.5 -0.1 +0.0 +0.1
nf_with_fulln NF_with_fullN -0.1 -0.4 -0.0 +0.1 +0.0
nl-ccm; ambient oxygen NL-CCM; ambient oxygen -0.2 -0.3 -0.0 -0.0 +0.1
mixed community NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum +0.1 -0.2 -0.1 +0.0 -0.1
nl-ccm; ambient oxygen NL-CCM; ambient oxygen -0.1 -0.2 -0.2 -0.0 +0.2
nitrogen source L-Glutamine (N); RCH2 media; no shaking +0.1 -0.2 +0.1 -0.1 -0.1
nf_with_fulln NF_with_fullN -0.0 -0.5 -0.0 +0.1 +0.1
nf_with_fulln NF_with_fullN +0.0 -0.4 -0.0 +0.1 -0.0
nl-ccm; high oxygen NL-CCM; high oxygen -0.2 -0.2 -0.0 +0.0 +0.2
nitrogen source Ammonium chloride (N); RCH2 media; no shaking +0.0 -0.3 -0.1 +0.1 +0.1
nitrogen source Ammonium chloride (N); RCH2 media; shaking +0.0 +0.2 +0.0 -0.0 -0.3
carbon source D,L-Lactate (C) -0.1 +0.2 -0.0 -0.1 +0.2
carbon source D-Mannitol (C) -0.0 +0.3 -0.1 +0.1 +0.1
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EX31_RS05120
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EX31_RS05125
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EX31_RS05135
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EX31_RS05140
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