Fitness for 5 genes in Rahnella sp. WP5

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500 ntEX31_RS05115 and EX31_RS05120 are separated by 1 nucleotidesEX31_RS05120 and EX31_RS05125 overlap by 4 nucleotidesEX31_RS05125 and EX31_RS05130 are separated by 156 nucleotidesEX31_RS05130 and EX31_RS05135 are separated by 41 nucleotides EX31_RS05115: EX31_RS05115 - lysophospholipid acyltransferase family protein, at 158,627 to 160,333 _RS05115 EX31_RS05120: EX31_RS05120 - serine hydrolase, at 160,335 to 161,585 _RS05120 EX31_RS05125: EX31_RS05125 - hypothetical protein, at 161,582 to 161,824 _RS05125 EX31_RS05130: EX31_RS05130 - HAMP domain-containing protein, at 161,981 to 163,636 _RS05130 EX31_RS05135: EX31_RS05135 - hypothetical protein, at 163,678 to 163,986 _RS05135
Group Condition EX31_RS05115 EX31_RS05120 EX31_RS05125 EX31_RS05130 EX31_RS05135
mixed community NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum -0.0 -0.0 -0.6 -0.2 -0.1
nf_with_fulln NF_with_fullN -0.1 -0.1 -0.5 -0.1 +0.1
nf_with_fulln NF_with_fullN -0.0 -0.0 -0.6 -0.2 +0.1
nl-ccm; high oxygen NL-CCM; high oxygen -0.0 -0.1 -0.4 -0.1 -0.1
nl-ccm; ambient oxygen NL-CCM; ambient oxygen +0.1 -0.2 -0.4 -0.1 -0.1
nln NLN -0.0 -0.1 -0.4 -0.1 -0.0
nln NLN -0.1 -0.1 -0.4 -0.1 +0.0
nitrogen source L-Glutamine (N); RCH2 media; no shaking +0.0 -0.0 -0.4 -0.1 -0.1
nf_with_fulln NF_with_fullN -0.1 -0.1 -0.4 -0.0 +0.1
nln NLN -0.0 -0.0 -0.4 -0.1 -0.1
nl-ccm; ambient oxygen NL-CCM; ambient oxygen +0.0 -0.1 -0.3 -0.2 +0.0
mgl MGL -0.0 +0.1 -0.5 -0.0 -0.1
nln NLN -0.1 +0.0 -0.3 -0.1 -0.1
nf_with_fulln NF_with_fullN -0.1 -0.0 -0.5 -0.0 +0.1
nl-ccm; ambient oxygen NL-CCM; ambient oxygen -0.0 -0.2 -0.3 -0.0 -0.0
nln NLN -0.1 -0.1 -0.2 -0.2 -0.1
mixed community NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum +0.0 +0.0 -0.3 -0.3 -0.0
mixed community NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum -0.1 +0.0 -0.3 -0.1 -0.1
nitrogen source Ammonium chloride (N); ShewMM media; shaking +0.0 +0.1 -0.5 -0.1 +0.0
nl-ccm; ambient oxygen NL-CCM; ambient oxygen +0.0 -0.2 -0.1 -0.2 -0.1
nf_with10percent_fulln NF_with10percent_fullN -0.1 -0.1 -0.2 -0.1 +0.1
nl-ccm; ambient oxygen NL-CCM; ambient oxygen +0.1 -0.1 -0.2 -0.2 -0.0
mixed community NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum -0.1 +0.1 -0.4 -0.1 -0.0
carbon source Sucrose (C) +0.1 -0.1 -0.4 -0.0 +0.1
nf_with_fulln NF_with_fullN -0.0 +0.0 -0.4 -0.0 +0.1
carbon source D-Xylose (C) +0.2 -0.1 -0.3 -0.1 -0.1
nl-ccm; high oxygen NL-CCM; high oxygen +0.1 -0.2 -0.2 -0.0 +0.0
carbon source NLDM_metabolites (C) +0.2 -0.3 -0.5 +0.2 +0.1
nitrogen source L-Glutamine (N); ShewMM media; no shaking +0.2 +0.0 -0.3 -0.1 -0.0
carbon source D-Mannitol (C) +0.0 -0.0 +0.3 -0.1 +0.1
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EX31_RS05115
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EX31_RS05120
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EX31_RS05130
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EX31_RS05135
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