Fitness for 5 genes in Rahnella sp. WP5

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 123 experiments or choose conditions or try the comparative fitness browser

500 ntEX31_RS04945 and EX31_RS04950 are separated by 10 nucleotidesEX31_RS04950 and EX31_RS04955 are separated by 25 nucleotidesEX31_RS04955 and EX31_RS04960 are separated by 10 nucleotidesEX31_RS04960 and EX31_RS04965 are separated by 56 nucleotides EX31_RS04945: EX31_RS04945 - L-ribulose-5-phosphate 3-epimerase, at 116,567 to 117,427 _RS04945 EX31_RS04950: EX31_RS04950 - 3-keto-L-gulonate-6-phosphate decarboxylase UlaD, at 117,438 to 118,094 _RS04950 EX31_RS04955: EX31_RS04955 - PTS ascorbate transporter subunit IIA, at 118,120 to 118,590 _RS04955 EX31_RS04960: EX31_RS04960 - PTS ascorbate transporter subunit IIB, at 118,601 to 118,909 _RS04960 EX31_RS04965: EX31_RS04965 - PTS ascorbate transporter subunit IIC, at 118,966 to 120,369 _RS04965
Group Condition EX31_RS04945 EX31_RS04950 EX31_RS04955 EX31_RS04960 EX31_RS04965
mgl MGL -0.2 +0.2 -0.3 +0.1 -0.0
nl-ccm; high oxygen NL-CCM; high oxygen +0.0 -0.1 +0.2 -0.2 -0.1
nitrogen source L-Serine (N); RCH2 media; shaking -0.1 -0.3 +0.3 +0.1 -0.1
mgl MGL -0.1 -0.1 +0.3 -0.2 -0.0
carbon source NLDM_metabolites (C) -0.1 -0.2 +0.3 -0.2 +0.1
nitrogen source Ammonium chloride (N); ShewMM media; no shaking -0.3 -0.2 +0.5 -0.1 +0.0
carbon source NLDM_metabolites (C) -0.4 +0.2 +0.2 +0.0 -0.1
carbon source Sucrose (C) -0.2 -0.1 +0.3 +0.0 +0.0
nitrogen source L-Serine (N); RCH2 media; no shaking +0.0 -0.2 +0.4 -0.2 +0.1
nitrogen source L-Glutamine (N); RCH2 media; no shaking -0.3 -0.1 +0.6 -0.2 +0.1
nitrogen source L-Glutamine (N); ShewMM media; no shaking -0.2 +0.0 +0.3 -0.1 +0.1
nitrogen source Ammonium chloride (N); ShewMM media; no shaking -0.1 +0.0 +0.3 +0.0 -0.1
mixed community NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum -0.1 -0.0 +0.4 +0.0 -0.1
carbon source Sucrose (C) +0.2 -0.0 +0.4 -0.2 -0.1
carbon source casaminos (C) +0.1 -0.1 +0.2 -0.1 +0.2
mgl MGL -0.1 -0.1 +0.4 +0.1 -0.1
nitrogen source L-Serine (N); ShewMM media; no shaking -0.1 +0.0 +0.5 -0.1 -0.1
nitrogen source L-Serine (N); RCH2 media; shaking -0.1 +0.2 +0.2 +0.1 +0.0
nitrogen source Ammonium chloride (N); RCH2 media; no shaking +0.1 -0.1 +0.3 +0.1 -0.1
nitrogen source L-Serine (N); RCH2 media; shaking -0.1 -0.1 +0.3 +0.2 +0.0
nl-ccm_agar NL-CCM_agar -0.1 +0.2 +0.2 +0.1 -0.1
carbon source D-Xylose (C) -0.0 +0.1 -0.3 +0.3 +0.2
nitrogen source L-Glutamine (N); ShewMM media; no shaking +0.1 -0.1 +0.4 +0.1 +0.0
mixed community NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum -0.0 +0.1 +0.4 +0.1 -0.0
carbon source D-Mannitol (C) +0.1 +0.1 +0.2 -0.0 +0.1
nitrogen source Ammonium chloride (N); RCH2 media; no shaking +0.0 +0.2 +0.3 +0.1 +0.0
nitrogen source Ammonium chloride (N); ShewMM media; shaking -0.2 +0.2 +0.5 +0.1 -0.0
nl-ccm NL-CCM -0.0 +0.2 +0.4 +0.1 +0.0
nitrogen source L-Serine (N); ShewMM media; no shaking +0.2 +0.1 +0.2 +0.1 +0.0
carbon source D,L-Lactate (C) +0.3 -0.2 +0.4 +0.2 +0.2
remove
EX31_RS04945
plot		 remove
EX31_RS04950
plot		 remove
EX31_RS04955		 remove
EX31_RS04960
plot		 remove
EX31_RS04965
plot