Fitness for 5 genes in Rahnella sp. WP5

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500 ntEX31_RS04915 and EX31_RS04920 are separated by 46 nucleotidesEX31_RS04920 and EX31_RS04925 are separated by 97 nucleotidesEX31_RS04925 and EX31_RS04930 are separated by 53 nucleotidesEX31_RS04930 and EX31_RS04935 are separated by 8 nucleotides EX31_RS04915: EX31_RS04915 - pimeloyl-ACP methyl ester esterase BioH, at 108,870 to 109,652 _RS04915 EX31_RS04920: EX31_RS04920 - DNA utilization protein GntX, at 109,699 to 110,388 _RS04920 EX31_RS04925: EX31_RS04925 - Fe-S biogenesis protein NfuA, at 110,486 to 111,061 _RS04925 EX31_RS04930: EX31_RS04930 - 4-alpha-glucanotransferase, at 111,115 to 113,190 _RS04930 EX31_RS04935: EX31_RS04935 - maltodextrin phosphorylase, at 113,199 to 115,613 _RS04935
Group Condition EX31_RS04915 EX31_RS04920 EX31_RS04925 EX31_RS04930 EX31_RS04935
carbon source Sucrose (C) +0.2 -0.1 -4.0 -0.0 -0.0
nitrogen source Ammonium chloride (N); ShewMM media; no shaking +0.1 -0.1 -2.7 -0.1 +0.0
carbon source D-Glucose (C) -0.1 +0.0 -2.2 -0.1 -0.1
nitrogen source L-Serine (N); ShewMM media; no shaking +0.2 +0.2 -2.3 -0.0 -0.0
nf_with_fulln NF_with_fullN -0.2 -0.1 -1.4 -0.0 -0.2
nitrogen source L-Serine (N); RCH2 media; shaking +0.1 +0.2 -2.0 -0.2 -0.0
mgl MGL -0.1 -0.0 -1.6 -0.0 -0.2
nitrogen source Ammonium chloride (N); ShewMM media; shaking +0.0 -0.2 -1.7 +0.0 -0.1
nitrogen source Ammonium chloride (N); ShewMM media; shaking +0.1 +0.1 -2.2 +0.0 +0.1
carbon source D-Xylose (C) -0.2 -0.3 -1.3 -0.2 +0.0
nitrogen source L-Serine (N); RCH2 media; no shaking +0.0 -0.1 -1.8 +0.1 +0.0
nitrogen source L-Serine (N); ShewMM media; shaking +0.0 -0.1 -1.6 -0.0 +0.1
nitrogen source L-Glutamine (N); RCH2 media; shaking -0.0 -0.3 -1.1 -0.1 -0.2
nitrogen source L-Glutamine (N); ShewMM media; no shaking -0.0 +0.0 -1.4 -0.1 -0.1
nitrogen source Ammonium chloride (N); RCH2 media; no shaking +0.0 +0.2 -1.8 -0.0 +0.1
nf_with_fulln NF_with_fullN -0.1 -0.0 -1.2 -0.0 -0.2
nitrogen source L-Serine (N); RCH2 media; no shaking -0.3 -0.1 -1.3 +0.0 +0.1
nitrogen source Ammonium chloride (N); ShewMM media; no shaking +0.1 +0.1 -1.7 -0.0 +0.1
nitrogen source L-Serine (N); RCH2 media; no shaking +0.2 +0.1 -1.7 -0.0 -0.0
nitrogen source L-Serine (N); RCH2 media; shaking +0.1 -0.0 -1.4 -0.1 -0.0
nf_with10percent_fulln NF_with10percent_fullN -0.1 +0.1 -1.2 -0.1 -0.1
nitrogen source Ammonium chloride (N); RCH2 media; shaking +0.0 -0.0 -1.5 +0.0 +0.1
nitrogen source L-Serine (N); ShewMM media; no shaking +0.1 -0.1 -1.3 -0.0 +0.0
nitrogen source Ammonium chloride (N); RCH2 media; shaking +0.1 +0.0 -1.4 -0.0 +0.1
nitrogen source Ammonium chloride (N); RCH2 media; no shaking +0.1 -0.1 -1.2 -0.1 +0.1
nitrogen source Ammonium chloride (N); RCH2 media; shaking +0.3 +0.1 -1.4 +0.0 -0.1
nl-ccm; ambient oxygen NL-CCM; ambient oxygen -0.2 +0.1 +1.1 -0.1 -0.1
nl-ccm; ambient oxygen NL-CCM; ambient oxygen -0.2 -0.1 +1.3 +0.0 -0.1
nl-ccm; ambient oxygen NL-CCM; ambient oxygen -0.3 +0.1 +1.3 -0.1 -0.0
nl-ccm; ambient oxygen NL-CCM; ambient oxygen -0.2 +0.0 +1.6 +0.0 -0.1
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EX31_RS04915
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EX31_RS04935
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