Fitness for 5 genes in Rahnella sp. WP5

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500 ntEX31_RS04120 and EX31_RS04125 are separated by 4 nucleotidesEX31_RS04125 and EX31_RS04130 are separated by 125 nucleotidesEX31_RS04130 and EX31_RS04135 are separated by 194 nucleotidesEX31_RS04135 and EX31_RS04140 are separated by 36 nucleotides EX31_RS04120: EX31_RS04120 - 16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC, at 348,770 to 349,816 _RS04120 EX31_RS04125: EX31_RS04125 - aldo/keto reductase, at 349,821 to 350,813 _RS04125 EX31_RS04130: EX31_RS04130 - LysR family transcriptional regulator, at 350,939 to 351,877 _RS04130 EX31_RS04135: EX31_RS04135 - tRNA-Leu, at 352,072 to 352,157 _RS04135 EX31_RS04140: EX31_RS04140 - tRNA-Leu, at 352,194 to 352,279 _RS04140
Group Condition EX31_RS04120 EX31_RS04125 EX31_RS04130 EX31_RS04135 EX31_RS04140
carbon source Sucrose (C) -0.2 -0.2 -0.2 -0.6 N.D.
nitrogen source L-Glutamine (N); ShewMM media; shaking -0.2 -0.1 -0.1 -0.5 N.D.
nitrogen source L-Glutamine (N); RCH2 media; shaking -0.3 -0.1 -0.1 -0.4 N.D.
nitrogen source L-Serine (N); ShewMM media; no shaking -0.3 -0.0 -0.1 -0.4 N.D.
nitrogen source L-Glutamine (N); ShewMM media; shaking -0.3 -0.2 -0.2 -0.1 N.D.
nitrogen source L-Glutamine (N); RCH2 media; no shaking -0.2 +0.1 -0.2 -0.4 N.D.
nitrogen source Ammonium chloride (N); ShewMM media; no shaking -0.2 -0.1 -0.2 -0.3 N.D.
nitrogen source L-Glutamine (N); RCH2 media; no shaking -0.2 -0.0 -0.0 -0.5 N.D.
nitrogen source L-Serine (N); ShewMM media; no shaking -0.2 -0.1 +0.1 -0.5 N.D.
nitrogen source L-Serine (N); ShewMM media; shaking -0.1 +0.1 +0.1 -0.6 N.D.
carbon source NLDM_metabolites (C) -0.3 +0.0 +0.2 -0.3 N.D.
carbon source D,L-Lactate (C) -0.1 +0.0 -0.5 +0.3 N.D.
mgl MGL -0.2 -0.2 +0.2 +0.3 N.D.
nl-ccm NL-CCM -0.1 -0.1 +0.2 +0.3 N.D.
nl-ccm; high oxygen NL-CCM; high oxygen +0.3 -0.1 +0.1 +0.4 N.D.
nf_with10percent_fulln NF_with10percent_fullN +0.1 +0.1 +0.0 +0.6 N.D.
nf_with10percent_fulln NF_with10percent_fullN +0.2 +0.2 -0.0 +0.5 N.D.
mgl MGL -0.0 +0.1 +0.1 +0.6 N.D.
nf_with10percent_fulln NF_with10percent_fullN +0.1 +0.1 +0.2 +0.6 N.D.
nl-ccm; high oxygen NL-CCM; high oxygen +0.1 -0.0 +0.1 +0.8 N.D.
nl-ccm; high oxygen NL-CCM; high oxygen +0.2 +0.1 +0.0 +0.7 N.D.
nl-ccm; high oxygen NL-CCM; high oxygen +0.2 +0.2 -0.1 +0.7 N.D.
nl-ccm; high oxygen NL-CCM; high oxygen +0.3 +0.0 +0.1 +0.8 N.D.
nl-ccm; high oxygen NL-CCM; high oxygen +0.4 +0.2 +0.1 +0.9 N.D.
nl-ccm; ambient oxygen NL-CCM; ambient oxygen +0.4 -0.0 +0.1 +1.9 N.D.
nl-ccm; ambient oxygen NL-CCM; ambient oxygen +0.4 +0.2 +0.1 +1.8 N.D.
nl-ccm; ambient oxygen NL-CCM; ambient oxygen +0.3 +0.1 +0.1 +2.2 N.D.
nl-ccm; ambient oxygen NL-CCM; ambient oxygen +0.4 +0.1 +0.1 +2.3 N.D.
nl-ccm; ambient oxygen NL-CCM; ambient oxygen +0.4 +0.1 -0.0 +2.3 N.D.
nl-ccm; ambient oxygen NL-CCM; ambient oxygen +0.3 -0.0 +0.1 +2.5 N.D.
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EX31_RS04120
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EX31_RS04125
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EX31_RS04140
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