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Homologs
Fitness for 5 genes in
Rahnella sp. WP5
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
EX31_RS03820 and EX31_RS03825 are separated by 118 nucleotides
EX31_RS03825 and EX31_RS03830 are separated by 335 nucleotides
EX31_RS03830 and EX31_RS03835 are separated by 16 nucleotides
EX31_RS03835 and EX31_RS03840 are separated by 477 nucleotides
EX31_RS03820: EX31_RS03820 - glutathione-regulated potassium-efflux system oxidoreductase KefF, at 271,964 to 272,518
_RS03820
EX31_RS03825: EX31_RS03825 - glycoside hydrolase, at 272,637 to 275,228
_RS03825
EX31_RS03830: EX31_RS03830 - carbamoyl-phosphate synthase large subunit, at 275,564 to 278,788
_RS03830
EX31_RS03835: EX31_RS03835 - glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit, at 278,805 to 279,956
_RS03835
EX31_RS03840: EX31_RS03840 - 4-hydroxy-tetrahydrodipicolinate reductase, at 280,434 to 281,255
_RS03840
Group
Condition
EX31
_RS03820
EX31
_RS03825
EX31
_RS03830
EX31
_RS03835
EX31
_RS03840
nitrogen source
L-Glutamine (N); ShewMM media; no shaking
-0.1
-0.0
-5.5
-5.4
N.D.
nitrogen source
L-Glutamine (N); RCH2 media; no shaking
-0.0
+0.0
-5.6
-5.2
N.D.
nitrogen source
Ammonium chloride (N); RCH2 media; no shaking
-0.2
+0.0
-5.2
-5.4
N.D.
nitrogen source
L-Glutamine (N); RCH2 media; no shaking
-0.0
-0.0
-5.7
-5.1
N.D.
nitrogen source
L-Glutamine (N); ShewMM media; no shaking
-0.0
+0.0
-5.2
-5.5
N.D.
nitrogen source
L-Glutamine (N); RCH2 media; no shaking
-0.2
-0.0
-5.5
-4.7
N.D.
nitrogen source
L-Glutamine (N); ShewMM media; no shaking
+0.0
+0.0
-5.6
-4.8
N.D.
nitrogen source
Ammonium chloride (N); ShewMM media; shaking
-0.1
-0.0
-5.3
-4.9
N.D.
nitrogen source
Ammonium chloride (N); RCH2 media; no shaking
+0.3
-0.1
-5.5
-4.9
N.D.
nitrogen source
Ammonium chloride (N); ShewMM media; no shaking
-0.1
+0.0
-5.3
-4.7
N.D.
nitrogen source
Ammonium chloride (N); ShewMM media; shaking
+0.1
-0.0
-5.2
-4.9
N.D.
nitrogen source
Ammonium chloride (N); RCH2 media; shaking
-0.3
+0.0
-5.2
-4.7
N.D.
nitrogen source
Ammonium chloride (N); RCH2 media; no shaking
+0.0
-0.0
-5.4
-4.7
N.D.
nitrogen source
Ammonium chloride (N); ShewMM media; shaking
+0.2
+0.0
-5.6
-4.6
N.D.
nitrogen source
Ammonium chloride (N); RCH2 media; shaking
-0.1
+0.1
-5.0
-5.1
N.D.
nitrogen source
Ammonium chloride (N); RCH2 media; shaking
+0.1
-0.0
-5.6
-4.4
N.D.
nitrogen source
Ammonium chloride (N); ShewMM media; no shaking
+0.0
-0.0
-5.6
-4.4
N.D.
nitrogen source
L-Glutamine (N); RCH2 media; shaking
-0.1
+0.0
-4.8
-4.9
N.D.
nitrogen source
Ammonium chloride (N); ShewMM media; no shaking
-0.1
+0.0
-5.1
-4.7
N.D.
carbon source
D-Mannitol (C)
-0.0
+0.0
-4.8
-4.8
N.D.
nitrogen source
L-Glutamine (N); RCH2 media; shaking
+0.1
-0.0
-4.8
-4.9
N.D.
nitrogen source
L-Glutamine (N); ShewMM media; shaking
+0.1
+0.0
-4.9
-4.6
N.D.
nf_with_fulln
NF_with_fullN
+0.1
+0.0
-4.4
-5.0
N.D.
nitrogen source
L-Glutamine (N); ShewMM media; shaking
+0.1
+0.0
-4.7
-4.7
N.D.
carbon source
Sucrose (C)
+0.2
-0.0
-4.7
-4.7
N.D.
nitrogen source
L-Glutamine (N); ShewMM media; shaking
+0.1
+0.0
-4.8
-4.5
N.D.
nf_with_fulln
NF_with_fullN
+0.2
-0.0
-4.7
-4.3
N.D.
nf_with_fulln
NF_with_fullN
+0.2
-0.1
-4.6
-4.3
N.D.
nf_with_fulln
NF_with_fullN
+0.2
-0.1
-4.7
-4.2
N.D.
nf_with_fulln
NF_with_fullN
+0.3
-0.0
-4.4
-4.6
N.D.
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