Fitness for 5 genes in Rahnella sp. WP5

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500 ntEX31_RS03785 and EX31_RS03790 are separated by 5 nucleotidesEX31_RS03790 and EX31_RS03795 are separated by 82 nucleotidesEX31_RS03795 and EX31_RS03800 are separated by 269 nucleotidesEX31_RS03800 and EX31_RS03805 overlap by 10 nucleotides EX31_RS03785: EX31_RS03785 - Co2+/Mg2+ efflux protein ApaG, at 265,997 to 266,374 _RS03785 EX31_RS03790: EX31_RS03790 - bis(5'-nucleosyl)-tetraphosphatase (symmetrical), at 266,380 to 267,234 _RS03790 EX31_RS03795: EX31_RS03795 - type 3 dihydrofolate reductase, at 267,317 to 267,802 _RS03795 EX31_RS03800: EX31_RS03800 - threonine/serine exporter, at 268,072 to 268,542 _RS03800 EX31_RS03805: EX31_RS03805 - threonine/serine exporter ThrE family protein, at 268,533 to 269,342 _RS03805
Group Condition EX31_RS03785 EX31_RS03790 EX31_RS03795 EX31_RS03800 EX31_RS03805
mgl MGL +0.1 -4.6 N.D. -0.0 -0.0
mgl MGL +0.0 -4.6 N.D. +0.0 +0.1
mgl MGL +0.1 -4.7 N.D. +0.2 -0.1
nf_with10percent_fulln NF_with10percent_fullN +0.2 -4.2 N.D. -0.1 -0.2
nf_with_fulln NF_with_fullN -0.0 -3.9 N.D. +0.1 -0.1
carbon source D-Xylose (C) -0.4 -3.1 N.D. -0.1 -0.4
nl-ccm; low oxygen NL-CCM; low oxygen +0.1 -3.4 N.D. -0.3 -0.2
nf_with_fulln NF_with_fullN +0.1 -3.6 N.D. +0.0 -0.1
nln NLN +0.1 -3.6 N.D. -0.0 -0.0
nf_with_fulln NF_with_fullN -0.1 -3.3 N.D. -0.0 -0.1
nf_with10percent_fulln NF_with10percent_fullN +0.1 -3.6 N.D. -0.1 -0.0
nl-ccm; high oxygen NL-CCM; high oxygen -0.1 -3.6 N.D. +0.0 +0.1
mgl MGL +0.1 -3.4 N.D. +0.0 -0.2
nf_with_fulln NF_with_fullN -0.1 -3.3 N.D. -0.0 -0.0
nf_with10percent_fulln NF_with10percent_fullN +0.0 -3.1 N.D. -0.2 -0.0
nf_with_fulln NF_with_fullN +0.0 -3.0 N.D. -0.0 -0.2
nitrogen source Ammonium chloride (N); ShewMM media; no shaking +0.0 -3.0 N.D. -0.0 -0.2
nl-ccm; ambient oxygen NL-CCM; ambient oxygen +0.1 -3.0 N.D. -0.2 -0.1
nln NLN +0.1 -3.0 N.D. -0.0 -0.1
carbon source D-Xylose (C) -0.3 -2.9 N.D. +0.0 +0.1
nitrogen source Ammonium chloride (N); ShewMM media; no shaking -0.3 -2.5 N.D. +0.0 -0.2
nitrogen source L-Serine (N); RCH2 media; no shaking -0.2 -2.4 N.D. -0.2 -0.3
nl-ccm; high oxygen NL-CCM; high oxygen +0.2 -3.2 N.D. +0.0 -0.0
nf_with_fulln NF_with_fullN +0.1 -2.9 N.D. -0.0 -0.2
nf_with10percent_fulln NF_with10percent_fullN +0.1 -2.9 N.D. -0.0 -0.1
nitrogen source L-Glutamine (N); ShewMM media; no shaking +0.2 -2.8 N.D. -0.2 -0.2
mgl MGL +0.2 -2.7 N.D. -0.1 -0.3
nl-ccm; high oxygen NL-CCM; high oxygen +0.3 -2.8 N.D. -0.1 -0.1
nl-ccm; ambient oxygen NL-CCM; ambient oxygen +0.2 -2.3 N.D. -0.2 -0.2
carbon source D,L-Lactate (C) +0.8 -2.4 N.D. +0.2 +0.1
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