Fitness for 5 genes in Rahnella sp. WP5

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500 ntEX31_RS03690 and EX31_RS03695 are separated by 10 nucleotidesEX31_RS03695 and EX31_RS03700 are separated by 283 nucleotidesEX31_RS03700 and EX31_RS03705 are separated by 227 nucleotidesEX31_RS03705 and EX31_RS03710 are separated by 160 nucleotides EX31_RS03690: EX31_RS03690 - 3-isopropylmalate dehydratase large subunit, at 238,075 to 239,475 _RS03690 EX31_RS03695: EX31_RS03695 - 3-isopropylmalate dehydratase small subunit, at 239,486 to 240,088 _RS03695 EX31_RS03700: EX31_RS03700 - hypothetical protein, at 240,372 to 241,064 _RS03700 EX31_RS03705: EX31_RS03705 - MFS transporter, at 241,292 to 242,455 _RS03705 EX31_RS03710: EX31_RS03710 - glucose uptake inhibitor SgrT, at 242,616 to 242,801 _RS03710
Group Condition EX31_RS03690 EX31_RS03695 EX31_RS03700 EX31_RS03705 EX31_RS03710
nitrogen source Ammonium chloride (N); RCH2 media; no shaking -5.3 -6.8 -0.1 -0.1 -2.2
nitrogen source Ammonium chloride (N); ShewMM media; no shaking -5.8 -6.1 -0.0 +0.0 -2.3
nitrogen source L-Glutamine (N); RCH2 media; no shaking -5.4 -6.8 +0.0 -0.1 -1.4
nitrogen source Ammonium chloride (N); RCH2 media; shaking -5.0 -6.9 -0.1 -0.1 -1.4
nitrogen source Ammonium chloride (N); RCH2 media; shaking -5.4 -6.9 -0.2 +0.1 -1.0
carbon source D-Mannitol (C) -4.9 -6.5 -0.2 +0.0 -1.2
nitrogen source L-Glutamine (N); ShewMM media; shaking -5.0 -7.0 -0.2 +0.1 -0.5
nitrogen source Ammonium chloride (N); ShewMM media; shaking -5.3 -6.8 +0.1 -0.0 -0.4
nitrogen source Ammonium chloride (N); RCH2 media; no shaking -5.7 -5.9 -0.0 -0.0 -0.7
nitrogen source L-Glutamine (N); RCH2 media; shaking -5.1 -6.9 +0.3 +0.0 -0.5
nitrogen source L-Glutamine (N); RCH2 media; no shaking -5.5 -6.8 +0.1 -0.0 +0.1
nitrogen source L-Glutamine (N); ShewMM media; no shaking -5.6 -6.1 +0.1 +0.1 -0.6
nitrogen source L-Glutamine (N); RCH2 media; no shaking -5.6 -6.1 -0.1 -0.1 +0.1
nitrogen source L-Serine (N); RCH2 media; no shaking -4.8 -4.4 -0.2 -0.1 -2.2
nitrogen source Ammonium chloride (N); RCH2 media; no shaking -5.2 -6.0 -0.1 -0.1 -0.1
nitrogen source L-Glutamine (N); ShewMM media; no shaking -5.5 -5.6 +0.0 -0.1 -0.4
nf_with10percent_fulln NF_with10percent_fullN -4.4 -7.0 +0.0 +0.0 -0.2
nitrogen source L-Glutamine (N); ShewMM media; no shaking -5.4 -5.4 -0.1 +0.0 -0.5
nitrogen source L-Serine (N); ShewMM media; shaking -4.4 -5.6 -0.1 -0.1 -1.1
carbon source Sucrose (C) -4.4 -6.4 +0.4 +0.1 -0.8
nitrogen source Ammonium chloride (N); ShewMM media; no shaking -5.3 -6.0 +0.1 +0.1 +0.1
carbon source D-Xylose (C) -5.0 -5.0 +0.0 +0.1 -1.0
nitrogen source Ammonium chloride (N); ShewMM media; no shaking -5.2 -5.7 -0.0 -0.1 +0.2
nitrogen source Ammonium chloride (N); ShewMM media; shaking -4.9 -5.9 +0.0 +0.2 -0.1
nf_with_fulln NF_with_fullN -4.9 -5.3 -0.3 -0.1 -0.1
nf_with10percent_fulln NF_with10percent_fullN -4.0 -5.3 -0.1 +0.0 -1.3
nitrogen source Ammonium chloride (N); ShewMM media; shaking -5.5 -5.5 +0.1 -0.0 +0.3
carbon source D,L-Lactate (C) -3.8 -5.6 +0.2 +0.2 -1.7
nitrogen source L-Serine (N); RCH2 media; no shaking -4.7 -4.9 +0.1 +0.1 -0.9
nitrogen source L-Glutamine (N); ShewMM media; shaking -5.2 -5.1 +0.1 +0.2 -0.2
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