Fitness for 5 genes in Rahnella sp. WP5

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500 ntEX31_RS03625 and EX31_RS03630 overlap by 4 nucleotidesEX31_RS03630 and EX31_RS03635 overlap by 14 nucleotidesEX31_RS03635 and EX31_RS03640 are separated by 27 nucleotidesEX31_RS03640 and EX31_RS03645 overlap by 4 nucleotides EX31_RS03625: EX31_RS03625 - UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase, at 220,754 to 222,115 _RS03625 EX31_RS03630: EX31_RS03630 - UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase, at 222,112 to 223,599 _RS03630 EX31_RS03635: EX31_RS03635 - peptidoglycan glycosyltransferase FtsI, at 223,586 to 225,349 _RS03635 EX31_RS03640: EX31_RS03640 - cell division protein FtsL, at 225,377 to 225,697 _RS03640 EX31_RS03645: EX31_RS03645 - 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH, at 225,694 to 226,635 _RS03645
Group Condition EX31_RS03625 EX31_RS03630 EX31_RS03635 EX31_RS03640 EX31_RS03645
nl-ccm; high oxygen NL-CCM; high oxygen N.D. N.D. N.D. N.D. -2.7
nln NLN N.D. N.D. N.D. N.D. -2.6
nitrogen source L-Glutamine (N); RCH2 media; no shaking N.D. N.D. N.D. N.D. -2.4
nl-ccm; ambient oxygen NL-CCM; ambient oxygen N.D. N.D. N.D. N.D. -2.4
nitrogen source L-Glutamine (N); RCH2 media; no shaking N.D. N.D. N.D. N.D. -2.0
nitrogen source L-Glutamine (N); ShewMM media; no shaking N.D. N.D. N.D. N.D. -1.9
nl-ccm; high oxygen NL-CCM; high oxygen N.D. N.D. N.D. N.D. -1.9
nl-ccm; low oxygen NL-CCM; low oxygen N.D. N.D. N.D. N.D. -1.7
nl-ccm; low oxygen NL-CCM; low oxygen N.D. N.D. N.D. N.D. -1.7
nl-ccm; ambient oxygen NL-CCM; ambient oxygen N.D. N.D. N.D. N.D. -1.6
carbon source NLDM_metabolites (C) N.D. N.D. N.D. N.D. -1.5
carbon source D-Xylose (C) N.D. N.D. N.D. N.D. -1.5
nln NLN N.D. N.D. N.D. N.D. -1.4
nitrogen source Ammonium chloride (N); ShewMM media; no shaking N.D. N.D. N.D. N.D. -1.4
nl-ccm; high oxygen NL-CCM; high oxygen N.D. N.D. N.D. N.D. -1.3
nf_with10percent_fulln NF_with10percent_fullN N.D. N.D. N.D. N.D. -1.3
nln NLN N.D. N.D. N.D. N.D. -1.3
nl-ccm; ambient oxygen NL-CCM; ambient oxygen N.D. N.D. N.D. N.D. -1.3
nf_with_fulln NF_with_fullN N.D. N.D. N.D. N.D. -1.2
mixed community NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum N.D. N.D. N.D. N.D. -1.2
nl-ccm; ambient oxygen NL-CCM; ambient oxygen N.D. N.D. N.D. N.D. -1.2
nl-ccm; ambient oxygen NL-CCM; ambient oxygen N.D. N.D. N.D. N.D. -1.1
nl-ccm; low oxygen NL-CCM; low oxygen N.D. N.D. N.D. N.D. -1.1
nl-ccm; high oxygen NL-CCM; high oxygen N.D. N.D. N.D. N.D. -1.1
carbon source casaminos (C) N.D. N.D. N.D. N.D. -1.1
carbon source D-Mannitol (C) N.D. N.D. N.D. N.D. -1.0
nitrogen source L-Glutamine (N); RCH2 media; no shaking N.D. N.D. N.D. N.D. -1.0
nl-ccm; low oxygen NL-CCM; low oxygen N.D. N.D. N.D. N.D. -1.0
carbon source D,L-Lactate (C) N.D. N.D. N.D. N.D. -1.0
mgl MGL N.D. N.D. N.D. N.D. +1.4
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EX31_RS03625
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EX31_RS03630
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