Fitness for 5 genes in Rahnella sp. WP5

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500 ntEX31_RS03475 and EX31_RS03480 are separated by 13 nucleotidesEX31_RS03480 and EX31_RS03485 are separated by 163 nucleotidesEX31_RS03485 and EX31_RS03490 are separated by 429 nucleotidesEX31_RS03490 and EX31_RS03495 are separated by 216 nucleotides EX31_RS03475: EX31_RS03475 - pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase, at 185,961 to 187,859 _RS03475 EX31_RS03480: EX31_RS03480 - pyruvate dehydrogenase (acetyl-transferring), homodimeric type, at 187,873 to 190,536 _RS03480 EX31_RS03485: EX31_RS03485 - pyruvate dehydrogenase complex transcriptional repressor PdhR, at 190,700 to 191,470 _RS03485 EX31_RS03490: EX31_RS03490 - aromatic amino acid transporter AroP, at 191,900 to 193,270 _RS03490 EX31_RS03495: EX31_RS03495 - MFS transporter, at 193,487 to 194,929 _RS03495
Group Condition EX31_RS03475 EX31_RS03480 EX31_RS03485 EX31_RS03490 EX31_RS03495
carbon source D-Xylose (C) N.D. -2.5 -0.4 -0.2 -0.0
carbon source D-Xylose (C) N.D. -2.2 -0.6 -0.2 -0.0
carbon source D-Mannitol (C) N.D. -2.4 -0.4 -0.2 +0.0
carbon source D-Glucose (C) N.D. -2.4 -0.4 -0.1 -0.0
nitrogen source Ammonium chloride (N); RCH2 media; no shaking N.D. -2.5 -0.3 -0.0 +0.0
nitrogen source Ammonium chloride (N); RCH2 media; shaking N.D. -2.6 -0.0 -0.0 -0.0
nitrogen source Ammonium chloride (N); ShewMM media; shaking N.D. -2.6 -0.2 +0.0 -0.0
nitrogen source Ammonium chloride (N); RCH2 media; shaking N.D. -2.5 -0.1 -0.0 -0.0
nitrogen source Ammonium chloride (N); ShewMM media; no shaking N.D. -2.3 -0.1 -0.1 -0.1
nitrogen source L-Glutamine (N); RCH2 media; shaking N.D. -2.3 -0.3 +0.0 +0.1
nitrogen source L-Serine (N); RCH2 media; shaking N.D. -2.2 -0.1 -0.1 -0.1
carbon source Sucrose (C) N.D. -2.4 -0.2 -0.0 +0.1
carbon source D-Mannitol (C) N.D. -1.8 -0.4 -0.2 -0.1
nitrogen source L-Glutamine (N); RCH2 media; no shaking N.D. -2.0 -0.3 +0.0 -0.1
nitrogen source Ammonium chloride (N); ShewMM media; no shaking N.D. -2.1 -0.0 -0.2 +0.0
nitrogen source L-Glutamine (N); ShewMM media; shaking N.D. -2.2 -0.2 +0.0 -0.0
nitrogen source Ammonium chloride (N); ShewMM media; shaking N.D. -2.2 -0.1 -0.0 -0.0
nitrogen source Ammonium chloride (N); RCH2 media; shaking N.D. -2.3 -0.1 +0.0 +0.0
nitrogen source L-Glutamine (N); ShewMM media; shaking N.D. -2.0 -0.2 -0.0 -0.1
carbon source D,L-Lactate (C) N.D. -2.1 +0.0 -0.2 +0.0
nitrogen source L-Serine (N); ShewMM media; no shaking N.D. -2.2 +0.1 -0.1 -0.0
carbon source casaminos (C) N.D. -2.0 -0.3 +0.1 -0.1
nitrogen source Ammonium chloride (N); ShewMM media; shaking N.D. -2.0 +0.1 -0.1 -0.1
nitrogen source L-Glutamine (N); RCH2 media; shaking N.D. -2.0 -0.2 +0.0 +0.0
carbon source casaminos (C) N.D. -2.2 -0.1 +0.2 +0.0
nl-ccm; ambient oxygen NL-CCM; ambient oxygen N.D. +2.1 +0.3 +0.1 -0.0
nl-ccm; ambient oxygen NL-CCM; ambient oxygen N.D. +2.2 +0.4 +0.1 -0.1
nl-ccm; ambient oxygen NL-CCM; ambient oxygen N.D. +2.2 +0.3 +0.2 -0.0
nl-ccm; ambient oxygen NL-CCM; ambient oxygen N.D. +2.2 +0.5 +0.1 -0.0
nl-ccm; ambient oxygen NL-CCM; ambient oxygen N.D. +2.5 +0.5 +0.2 -0.1
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EX31_RS03475
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EX31_RS03480
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EX31_RS03495
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