Fitness for 5 genes in Rahnella sp. WP5

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 123 experiments or choose conditions or try the comparative fitness browser

500 ntEX31_RS03425 and EX31_RS03430 are separated by 262 nucleotidesEX31_RS03430 and EX31_RS03435 are separated by 24 nucleotidesEX31_RS03435 and EX31_RS03440 overlap by 4 nucleotidesEX31_RS03440 and EX31_RS03445 overlap by 14 nucleotides EX31_RS03425: EX31_RS03425 - fimbrial protein, at 174,771 to 175,295 _RS03425 EX31_RS03430: EX31_RS03430 - extracellular solute-binding protein, at 175,558 to 176,646 _RS03430 EX31_RS03435: EX31_RS03435 - ABC transporter permease, at 176,671 to 177,507 _RS03435 EX31_RS03440: EX31_RS03440 - ABC transporter permease, at 177,504 to 178,367 _RS03440 EX31_RS03445: EX31_RS03445 - ABC transporter ATP-binding protein, at 178,354 to 179,445 _RS03445
Group Condition EX31_RS03425 EX31_RS03430 EX31_RS03435 EX31_RS03440 EX31_RS03445
nl-ccm; ambient oxygen NL-CCM; ambient oxygen -0.4 -0.3 -0.2 -0.1 -0.0
nf_with10percent_fulln NF_with10percent_fullN -0.2 -0.3 -0.2 -0.3 -0.1
carbon source D-Xylose (C) -0.4 -0.4 -0.1 -0.1 +0.0
nl-ccm; ambient oxygen NL-CCM; ambient oxygen -0.2 -0.2 -0.0 -0.2 -0.2
carbon source D-Glucose (C) -0.6 -0.1 -0.0 -0.0 -0.1
carbon source D-Xylose (C) -0.4 +0.0 +0.0 -0.2 -0.2
nl-ccm; ambient oxygen NL-CCM; ambient oxygen -0.3 -0.1 -0.2 -0.1 -0.1
carbon source D,L-Lactate (C) -0.3 -0.1 -0.1 -0.1 -0.1
nf_with10percent_fulln NF_with10percent_fullN -0.3 -0.1 -0.1 -0.1 -0.1
mgl MGL +0.0 -0.1 -0.2 -0.1 -0.3
nl-ccm; ambient oxygen NL-CCM; ambient oxygen -0.3 -0.1 -0.0 -0.1 -0.1
nf_with_fulln NF_with_fullN -0.2 -0.1 -0.1 -0.2 +0.0
nf_with_fulln NF_with_fullN -0.3 -0.1 +0.0 -0.1 -0.2
nl-ccm; high oxygen NL-CCM; high oxygen +0.0 -0.2 -0.1 -0.2 -0.1
nl-ccm; high oxygen NL-CCM; high oxygen -0.2 -0.2 +0.0 -0.2 +0.0
nl-ccm; ambient oxygen NL-CCM; ambient oxygen +0.1 -0.2 -0.2 -0.2 -0.1
nitrogen source L-Serine (N); ShewMM media; no shaking -0.5 +0.0 +0.2 -0.1 -0.1
nf_with10percent_fulln NF_with10percent_fullN -0.3 -0.1 +0.1 -0.1 -0.1
carbon source NLDM_metabolites (C) -0.2 -0.3 +0.3 +0.0 -0.1
carbon source NLDM_metabolites (C) -0.6 +0.0 +0.5 +0.0 -0.1
mixed community NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum +0.2 +0.0 -0.3 -0.1 -0.0
nf_with_fulln NF_with_fullN -0.1 +0.3 -0.1 -0.2 -0.0
nitrogen source L-Glutamine (N); ShewMM media; no shaking -0.2 -0.3 +0.1 +0.2 +0.1
mixed community NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum +0.3 -0.1 -0.3 +0.1 -0.0
nitrogen source L-Glutamine (N); RCH2 media; shaking -0.1 -0.2 -0.1 +0.3 +0.0
nitrogen source Ammonium chloride (N); RCH2 media; shaking -0.3 -0.0 +0.2 +0.1 +0.1
nitrogen source L-Serine (N); RCH2 media; no shaking -0.2 +0.2 +0.2 +0.1 -0.1
mixed community NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum +0.3 +0.1 +0.2 +0.0 -0.1
nl-ccm_agar NL-CCM_agar +0.4 +0.0 -0.0 +0.2 +0.1
nitrogen source Ammonium chloride (N); ShewMM media; shaking +0.1 +0.1 +0.3 +0.1 +0.1
remove
EX31_RS03425
plot		 remove
EX31_RS03430
plot		 remove
EX31_RS03435		 remove
EX31_RS03440
plot		 remove
EX31_RS03445
plot