Fitness for 5 genes in Rahnella sp. WP5

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500 ntEX31_RS03325 and EX31_RS03330 are separated by 262 nucleotidesEX31_RS03330 and EX31_RS03335 are separated by 213 nucleotidesEX31_RS03335 and EX31_RS03340 are separated by 79 nucleotidesEX31_RS03340 and EX31_RS03345 are separated by 103 nucleotides EX31_RS03325: EX31_RS03325 - DUF2778 domain-containing protein, at 154,625 to 154,984 _RS03325 EX31_RS03330: EX31_RS03330 - hypoxanthine phosphoribosyltransferase, at 155,247 to 155,783 _RS03330 EX31_RS03335: EX31_RS03335 - DNA-binding transcriptional repressor, at 155,997 to 156,770 _RS03335 EX31_RS03340: EX31_RS03340 - transcriptional regulator GutM, at 156,850 to 157,212 _RS03340 EX31_RS03345: EX31_RS03345 - sorbitol-6-phosphate dehydrogenase, at 157,316 to 158,095 _RS03345
Group Condition EX31_RS03325 EX31_RS03330 EX31_RS03335 EX31_RS03340 EX31_RS03345
nitrogen source L-Glutamine (N); RCH2 media; no shaking -0.7 -1.7 +0.0 -0.3 +0.0
nitrogen source Ammonium chloride (N); ShewMM media; no shaking +0.3 -1.3 -0.0 -0.6 +0.1
mixed community NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum -0.1 -0.5 +0.0 -0.7 -0.0
nln NLN -0.2 -0.5 -0.1 -0.2 -0.2
mixed community NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum +0.0 -0.6 -0.2 -0.4 -0.2
mgl MGL +0.1 -0.6 -0.5 -0.1 -0.2
nf_with_fulln NF_with_fullN -0.5 -0.2 -0.4 +0.2 -0.3
nitrogen source Ammonium chloride (N); RCH2 media; shaking +0.2 -1.5 +0.0 +0.1 +0.0
nf_with_fulln NF_with_fullN -0.3 -0.3 -0.6 +0.2 -0.2
nitrogen source Ammonium chloride (N); RCH2 media; no shaking +0.8 -1.1 -0.1 -0.5 +0.0
nf_with_fulln NF_with_fullN -0.5 +0.3 -0.7 +0.3 -0.2
nitrogen source L-Serine (N); RCH2 media; shaking +0.4 -0.7 +0.1 -0.4 -0.2
nl-ccm; ambient oxygen NL-CCM; ambient oxygen -0.2 -0.4 +0.2 -0.2 -0.2
carbon source casaminos (C) +0.3 -0.3 -0.0 -0.6 -0.2
nl-ccm; ambient oxygen NL-CCM; ambient oxygen -0.5 -0.5 +0.4 -0.0 -0.1
carbon source D,L-Lactate (C) -0.6 -0.4 +0.7 -0.3 -0.1
nf_with_fulln NF_with_fullN -0.4 +0.2 -0.5 +0.3 -0.2
nitrogen source Ammonium chloride (N); ShewMM media; no shaking +0.2 -0.8 -0.1 -0.1 +0.2
nitrogen source Ammonium chloride (N); ShewMM media; shaking -0.6 +0.5 -0.1 -0.3 +0.0
nln NLN -0.7 +0.4 -0.1 -0.0 -0.1
mixed community NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum +0.3 -0.7 +0.0 +0.1 -0.2
nitrogen source L-Glutamine (N); ShewMM media; no shaking +0.0 -0.6 +0.2 -0.2 +0.3
nitrogen source L-Serine (N); RCH2 media; no shaking -0.1 -0.1 +0.3 -0.6 +0.2
carbon source D,L-Lactate (C) -0.1 +0.0 +0.8 -0.4 -0.2
nitrogen source L-Glutamine (N); ShewMM media; no shaking +0.3 -0.5 +0.2 +0.2 +0.2
nitrogen source L-Serine (N); RCH2 media; shaking +0.4 +0.4 +0.2 -0.6 -0.1
nitrogen source L-Glutamine (N); RCH2 media; shaking +0.4 +0.5 +0.0 -0.6 +0.1
nitrogen source Ammonium chloride (N); ShewMM media; no shaking +0.2 +0.8 -0.1 +0.2 +0.0
nitrogen source L-Serine (N); RCH2 media; no shaking +0.3 +0.8 +0.0 +0.3 +0.2
nitrogen source L-Serine (N); RCH2 media; no shaking +0.4 +0.2 +0.3 +0.8 +0.0
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EX31_RS03325
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EX31_RS03330
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EX31_RS03345
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