Fitness for 5 genes in Rahnella sp. WP5

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500 ntEX31_RS02875 and EX31_RS02880 are separated by 14 nucleotidesEX31_RS02880 and EX31_RS02885 are separated by 118 nucleotidesEX31_RS02885 and EX31_RS02890 are separated by 8 nucleotidesEX31_RS02890 and EX31_RS02895 are separated by 18 nucleotides EX31_RS02875: EX31_RS02875 - phosphomannomutase CpsG, at 50,118 to 51,497 _RS02875 EX31_RS02880: EX31_RS02880 - mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase, at 51,512 to 52,933 _RS02880 EX31_RS02885: EX31_RS02885 - glycosyltransferase family 2 protein, at 53,052 to 54,041 _RS02885 EX31_RS02890: EX31_RS02890 - lipopolysaccharide biosynthesis protein, at 54,050 to 55,513 _RS02890 EX31_RS02895: EX31_RS02895 - hypothetical protein, at 55,532 to 56,548 _RS02895
Group Condition EX31_RS02875 EX31_RS02880 EX31_RS02885 EX31_RS02890 EX31_RS02895
nl-ccm; high oxygen NL-CCM; high oxygen -0.1 -0.4 -0.8 -0.3 -0.3
nf_with10percent_fulln NF_with10percent_fullN -0.2 -0.2 -0.6 -0.2 -0.4
nl-ccm; ambient oxygen NL-CCM; ambient oxygen -0.3 -0.3 -0.4 -0.4 -0.3
nl-ccm; ambient oxygen NL-CCM; ambient oxygen -0.2 -0.2 -0.5 -0.2 -0.4
nf_with10percent_fulln NF_with10percent_fullN -0.2 -0.1 -0.6 -0.2 -0.4
nf_with10percent_fulln NF_with10percent_fullN -0.2 -0.2 -0.3 -0.2 -0.4
nl-ccm; ambient oxygen NL-CCM; ambient oxygen -0.2 -0.2 -0.6 -0.2 -0.2
nf_with10percent_fulln NF_with10percent_fullN -0.2 -0.2 -0.3 -0.3 -0.4
nl-ccm; high oxygen NL-CCM; high oxygen -0.3 -0.2 -0.4 -0.1 -0.3
nf_with10percent_fulln NF_with10percent_fullN -0.2 -0.0 -0.4 -0.2 -0.4
nl-ccm; high oxygen NL-CCM; high oxygen -0.2 -0.2 -0.3 -0.2 -0.3
nl-ccm; ambient oxygen NL-CCM; ambient oxygen -0.2 -0.3 -0.3 +0.1 -0.3
carbon source Sucrose (C) +0.2 +0.3 -0.2 +0.3 +0.2
carbon source NLDM_metabolites (C) +0.2 +0.4 -0.2 +0.3 +0.3
mixed community NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum +0.3 +0.3 +0.3 +0.0 +0.3
nitrogen source Ammonium chloride (N); ShewMM media; shaking +0.0 -0.2 +0.3 +0.7 +0.4
nitrogen source L-Serine (N); ShewMM media; shaking +0.1 +0.1 +0.2 +0.4 +0.4
mixed community NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum +0.3 +0.3 +0.4 +0.2 +0.2
mixed community NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum +0.1 +0.3 +0.2 +0.4 +0.3
mixed community NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum +0.2 +0.3 +0.3 +0.3 +0.2
carbon source D-Glucose (C) +0.3 +0.3 +0.2 +0.3 +0.2
mixed community NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum +0.2 +0.2 +0.2 +0.4 +0.4
nitrogen source Ammonium chloride (N); ShewMM media; no shaking +0.1 -0.0 +0.6 +0.3 +0.4
nitrogen source L-Glutamine (N); ShewMM media; shaking +0.1 -0.1 +0.3 +0.6 +0.5
nitrogen source L-Glutamine (N); ShewMM media; shaking +0.1 -0.1 +0.4 +0.7 +0.4
nitrogen source L-Serine (N); ShewMM media; shaking +0.1 +0.0 +0.4 +0.7 +0.5
carbon source Sucrose (C) +0.3 +0.4 +0.3 +0.3 +0.5
mixed community NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum +0.2 +0.2 +0.6 +0.4 +0.5
carbon source D-Mannitol (C) +0.4 +0.2 +0.4 +0.5 +0.3
nitrogen source L-Glutamine (N); ShewMM media; shaking +0.1 +0.1 +0.4 +0.9 +1.0
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EX31_RS02875
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EX31_RS02880
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EX31_RS02890
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EX31_RS02895
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