Fitness for 5 genes in Rahnella sp. WP5

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	EX31_RS02250	EX31_RS02255	EX31_RS02260	EX31_RS02265	EX31_RS02270
carbon source	NLDM_metabolites (C)	+0.1	-0.8	-0.2	-0.7	-0.9
mgl	MGL	-0.3	-0.2	-0.4	-0.0	-0.7
carbon source	D-Mannitol (C)	+0.0	-0.0	-0.9	-0.3	-0.1
nitrogen source	Ammonium chloride (N); ShewMM media; shaking	-0.2	-0.2	-0.2	-0.1	-0.6
nl-ccm_agar	NL-CCM_agar	-0.2	-0.1	-0.3	-0.1	-0.7
mixed community	NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum	-0.4	-0.3	-0.4	-0.1	-0.1
nl-ccm; high oxygen	NL-CCM; high oxygen	-0.2	-0.2	-0.3	-0.1	-0.5
mixed community	NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum	-0.0	-0.2	-0.1	-0.2	-0.5
nl-ccm; high oxygen	NL-CCM; high oxygen	-0.0	+0.1	-0.1	-0.2	-0.8
nl-ccm; ambient oxygen	NL-CCM; ambient oxygen	-0.2	+0.1	-0.3	+0.1	-0.6
nl-ccm; high oxygen	NL-CCM; high oxygen	+0.0	+0.0	-0.6	+0.0	-0.4
nf_with10percent_fulln	NF_with10percent_fullN	-0.1	+0.3	+0.0	-0.1	-1.0
mixed community	NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum	-0.2	-0.1	-0.3	+0.1	-0.3
nl-ccm	NL-CCM	-0.1	-0.1	-0.5	-0.3	+0.2
carbon source	D-Xylose (C)	-0.3	+0.0	-0.4	-0.4	+0.3
mixed community	NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum	+0.2	-0.2	-0.0	-0.1	-0.6
nf_with10percent_fulln	NF_with10percent_fullN	+0.1	+0.1	-0.4	-0.0	-0.6
carbon source	Sucrose (C)	-0.5	+0.0	+0.3	-0.2	-0.2
nitrogen source	L-Serine (N); RCH2 media; shaking	-0.4	-0.5	+0.1	-0.1	+0.3
nf_with10percent_fulln	NF_with10percent_fullN	+0.1	+0.2	-0.2	-0.1	-0.5
nl-ccm; high oxygen	NL-CCM; high oxygen	-0.1	+0.3	+0.1	-0.1	-0.7
nitrogen source	L-Serine (N); RCH2 media; no shaking	-0.1	-0.3	-0.5	-0.1	+0.5
nitrogen source	L-Serine (N); ShewMM media; no shaking	-0.2	-0.6	+0.2	+0.0	+0.2
nitrogen source	L-Glutamine (N); ShewMM media; no shaking	-0.4	-0.2	-0.0	-0.1	+0.4
nitrogen source	L-Glutamine (N); ShewMM media; no shaking	+0.0	+0.1	-0.5	+0.4	-0.3
nitrogen source	Ammonium chloride (N); RCH2 media; no shaking	-0.1	-0.3	-0.2	-0.1	+0.6
nitrogen source	L-Serine (N); ShewMM media; shaking	-0.5	-0.2	+0.2	+0.2	+0.3
carbon source	D,L-Lactate (C)	-0.3	+0.4	+0.3	+0.1	+0.4
nitrogen source	L-Serine (N); ShewMM media; shaking	-0.1	+0.1	-0.0	+0.1	+0.7
nitrogen source	L-Glutamine (N); RCH2 media; no shaking	-0.0	-0.0	-0.0	+0.1	+1.0