Fitness for 5 genes in Rahnella sp. WP5

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500 ntEX31_RS01895 and EX31_RS01900 are separated by 51 nucleotidesEX31_RS01900 and EX31_RS01905 overlap by 4 nucleotidesEX31_RS01905 and EX31_RS01910 are separated by 46 nucleotidesEX31_RS01910 and EX31_RS01915 overlap by 4 nucleotides EX31_RS01895: EX31_RS01895 - type VI secretion system tip protein VgrG, at 410,821 to 413,367 _RS01895 EX31_RS01900: EX31_RS01900 - hypothetical protein, at 413,419 to 413,703 _RS01900 EX31_RS01905: EX31_RS01905 - hypothetical protein, at 413,700 to 414,128 _RS01905 EX31_RS01910: EX31_RS01910 - lipase family protein, at 414,175 to 416,124 _RS01910 EX31_RS01915: EX31_RS01915 - hypothetical protein, at 416,121 to 416,895 _RS01915
Group Condition EX31_RS01895 EX31_RS01900 EX31_RS01905 EX31_RS01910 EX31_RS01915
nf_with10percent_fulln NF_with10percent_fullN -0.1 -0.4 -0.5 -0.3 -0.6
nf_with10percent_fulln NF_with10percent_fullN -0.0 -0.4 -0.1 -0.3 -1.2
carbon source Sucrose (C) -0.1 -0.5 +0.3 -0.2 -1.4
nf_with10percent_fulln NF_with10percent_fullN -0.1 -0.7 -0.3 -0.4 -0.3
nl-ccm; high oxygen NL-CCM; high oxygen -0.0 -0.4 -0.3 -0.4 -0.4
carbon source NLDM_metabolites (C) -0.0 -0.9 -0.9 -0.0 +0.3
nf_with_fulln NF_with_fullN -0.0 -0.3 -0.2 -0.1 -0.9
nitrogen source Ammonium chloride (N); RCH2 media; no shaking -0.3 -0.7 +0.2 +0.0 -0.8
nl-ccm; high oxygen NL-CCM; high oxygen -0.0 +0.1 -0.3 -0.4 -0.9
nl-ccm; ambient oxygen NL-CCM; ambient oxygen -0.1 +0.2 -0.2 -0.3 -0.9
nitrogen source Ammonium chloride (N); ShewMM media; no shaking -0.2 -0.6 +0.0 +0.3 -0.7
nitrogen source L-Serine (N); ShewMM media; no shaking -0.2 -0.6 -0.4 -0.1 +0.3
carbon source casaminos (C) +0.2 -0.2 -1.0 +0.1 +0.1
nl-ccm; high oxygen NL-CCM; high oxygen +0.1 +0.2 -0.8 -0.4 +0.1
nitrogen source L-Glutamine (N); RCH2 media; no shaking +0.1 -0.2 -0.4 +0.5 -0.4
nitrogen source L-Glutamine (N); ShewMM media; shaking +0.1 -0.7 -0.5 +0.2 +0.5
nitrogen source L-Serine (N); RCH2 media; shaking +0.0 -0.6 -0.4 +0.4 +0.3
nitrogen source L-Serine (N); ShewMM media; shaking -0.1 -0.2 -0.4 -0.3 +0.9
nitrogen source Ammonium chloride (N); ShewMM media; shaking -0.2 -0.5 -0.4 +0.2 +0.8
nitrogen source L-Serine (N); ShewMM media; shaking +0.0 +0.3 -0.9 +0.4 +0.3
nitrogen source Ammonium chloride (N); RCH2 media; shaking +0.1 +0.1 -0.7 +0.2 +0.6
mgl MGL +0.2 +0.4 -0.4 -0.2 +0.5
nitrogen source L-Serine (N); RCH2 media; shaking -0.3 +0.1 -0.2 +0.4 +0.5
nitrogen source L-Serine (N); ShewMM media; shaking +0.0 +0.2 -0.5 +0.4 +0.5
nitrogen source Ammonium chloride (N); RCH2 media; no shaking -0.0 -0.2 -0.3 +0.5 +0.8
nitrogen source L-Serine (N); RCH2 media; no shaking -0.0 -0.4 +0.1 +0.2 +0.9
carbon source NLDM_metabolites (C) +0.1 -0.2 +0.1 -0.1 +1.3
mixed community NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum +0.1 +0.3 +0.7 -0.2 +0.4
mgl MGL +0.1 +0.6 +0.6 +0.1 +0.3
mixed community NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum +0.2 +0.5 +0.4 +0.3 +0.6
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EX31_RS01895
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EX31_RS01900
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EX31_RS01910
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EX31_RS01915
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