Fitness for 5 genes in Rahnella sp. WP5

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 123 experiments or choose conditions or try the comparative fitness browser

500 ntEX31_RS01450 and EX31_RS01455 are separated by 32 nucleotidesEX31_RS01455 and EX31_RS01460 are separated by 122 nucleotidesEX31_RS01460 and EX31_RS01465 are separated by 292 nucleotidesEX31_RS01465 and EX31_RS01470 are separated by 3 nucleotides EX31_RS01450: EX31_RS01450 - hypothetical protein, at 325,657 to 327,060 _RS01450 EX31_RS01455: EX31_RS01455 - alpha-amylase, at 327,093 to 328,574 _RS01455 EX31_RS01460: EX31_RS01460 - glycine betaine/L-proline transporter ProP, at 328,697 to 330,199 _RS01460 EX31_RS01465: EX31_RS01465 - oligogalacturonate lyase, at 330,492 to 331,673 _RS01465 EX31_RS01470: EX31_RS01470 - cupin domain-containing protein, at 331,677 to 331,997 _RS01470
Group Condition EX31_RS01450 EX31_RS01455 EX31_RS01460 EX31_RS01465 EX31_RS01470
nitrogen source Ammonium chloride (N); RCH2 media; no shaking -0.1 -0.5 -0.1 -0.3 +0.1
nitrogen source L-Serine (N); ShewMM media; no shaking +0.1 -0.3 -0.1 -0.2 -0.1
nitrogen source Ammonium chloride (N); ShewMM media; no shaking +0.1 -0.2 -0.2 +0.1 -0.3
nitrogen source L-Glutamine (N); RCH2 media; shaking +0.0 -0.5 +0.2 -0.1 +0.1
nitrogen source L-Glutamine (N); ShewMM media; no shaking +0.1 -0.4 -0.1 +0.3 -0.1
nitrogen source L-Serine (N); ShewMM media; no shaking +0.0 -0.4 -0.0 -0.1 +0.4
nitrogen source L-Serine (N); ShewMM media; shaking -0.2 -0.3 +0.0 +0.2 +0.1
nf_with_fulln NF_with_fullN +0.0 -0.4 +0.0 +0.4 -0.0
carbon source Sucrose (C) -0.2 -0.3 +0.1 +0.2 +0.2
nitrogen source L-Serine (N); RCH2 media; shaking +0.1 -0.5 +0.1 -0.0 +0.3
nitrogen source Ammonium chloride (N); RCH2 media; shaking +0.3 -0.3 -0.2 +0.1 +0.3
nitrogen source L-Glutamine (N); ShewMM media; shaking +0.4 -0.4 +0.2 +0.0 +0.0
nitrogen source L-Glutamine (N); ShewMM media; no shaking +0.3 -0.2 +0.1 -0.2 +0.1
carbon source D,L-Lactate (C) +0.2 -0.5 +0.4 +0.0 +0.1
nitrogen source L-Glutamine (N); ShewMM media; shaking +0.3 -0.2 +0.2 -0.2 +0.2
nl-ccm NL-CCM +0.3 -0.1 +0.1 -0.1 +0.3
carbon source Sucrose (C) -0.1 +0.1 +0.4 +0.1 -0.1
nitrogen source L-Serine (N); ShewMM media; shaking +0.3 -0.3 +0.1 +0.1 +0.3
nitrogen source L-Glutamine (N); RCH2 media; no shaking +0.1 -0.3 +0.2 +0.4 +0.1
carbon source NLDM_metabolites (C) +0.2 +0.6 +0.0 +0.3 -0.6
carbon source D-Mannitol (C) +0.1 +0.1 +0.2 +0.3 -0.1
nitrogen source L-Glutamine (N); RCH2 media; shaking +0.1 -0.1 +0.0 +0.3 +0.3
carbon source NLDM_metabolites (C) +0.0 -0.2 +0.3 +0.4 +0.3
carbon source casaminos (C) +0.0 +0.2 +0.2 +0.4 -0.1
nln NLN +0.1 +0.2 +0.2 +0.1 +0.3
nitrogen source L-Serine (N); ShewMM media; shaking +0.3 -0.0 +0.0 +0.5 +0.1
mixed community NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum +0.1 +0.4 +0.1 +0.2 +0.1
carbon source D-Xylose (C) +0.2 -0.0 +0.1 +0.5 +0.2
carbon source casaminos (C) +0.2 -0.1 +0.2 +0.2 +0.6
mixed community NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum +0.2 +0.2 +0.3 +0.2 +0.2
remove
EX31_RS01450
plot		 remove
EX31_RS01455
plot		 remove
EX31_RS01460		 remove
EX31_RS01465
plot		 remove
EX31_RS01470
plot