Fitness for 5 genes in Rahnella sp. WP5

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 123 experiments or choose conditions or try the comparative fitness browser

500 ntEX31_RS01325 and EX31_RS01330 are separated by 345 nucleotidesEX31_RS01330 and EX31_RS01335 are separated by 68 nucleotidesEX31_RS01335 and EX31_RS01340 are separated by 86 nucleotidesEX31_RS01340 and EX31_RS01345 are separated by 385 nucleotides EX31_RS01325: EX31_RS01325 - hypothetical protein, at 295,904 to 296,149 _RS01325 EX31_RS01330: EX31_RS01330 - porin, at 296,495 to 297,175 _RS01330 EX31_RS01335: EX31_RS01335 - right-handed parallel beta-helix repeat-containing protein, at 297,244 to 299,412 _RS01335 EX31_RS01340: EX31_RS01340 - MFS transporter, at 299,499 to 301,064 _RS01340 EX31_RS01345: EX31_RS01345 - DUF535 domain-containing protein, at 301,450 to 302,430 _RS01345
Group Condition EX31_RS01325 EX31_RS01330 EX31_RS01335 EX31_RS01340 EX31_RS01345
carbon source NLDM_metabolites (C) -0.3 -0.6 -0.2 -0.4 -0.2
nitrogen source Ammonium chloride (N); ShewMM media; shaking -1.0 -0.5 -0.0 +0.1 -0.2
nitrogen source L-Serine (N); ShewMM media; no shaking -0.3 -0.4 -0.3 -0.1 -0.4
nitrogen source L-Serine (N); RCH2 media; shaking -0.6 -0.7 +0.1 +0.0 -0.1
carbon source Sucrose (C) -0.8 -0.1 -0.0 -0.1 -0.3
mixed community NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum -1.2 +0.2 +0.1 -0.1 -0.1
nitrogen source L-Glutamine (N); ShewMM media; no shaking -0.8 -0.3 -0.2 +0.3 -0.1
nitrogen source L-Serine (N); RCH2 media; no shaking -1.0 +0.0 +0.2 -0.0 -0.0
carbon source D-Mannitol (C) -0.6 -0.1 -0.2 +0.2 -0.2
nitrogen source Ammonium chloride (N); ShewMM media; shaking -0.8 +0.4 -0.2 -0.0 -0.3
nitrogen source Ammonium chloride (N); RCH2 media; shaking -0.5 -0.4 +0.2 -0.0 -0.1
carbon source D-Glucose (C) -0.8 +0.2 -0.1 +0.2 -0.3
carbon source casaminos (C) -0.4 -0.7 +0.3 +0.1 +0.0
carbon source D-Mannitol (C) -0.8 +0.2 -0.1 +0.2 -0.0
nitrogen source L-Glutamine (N); ShewMM media; shaking -0.6 +0.4 -0.0 -0.0 -0.2
nitrogen source Ammonium chloride (N); ShewMM media; no shaking -0.1 -0.7 +0.1 +0.2 -0.1
carbon source D-Xylose (C) -0.3 +0.4 -0.4 +0.1 -0.1
carbon source D-Xylose (C) -0.9 +0.2 +0.3 +0.1 +0.0
carbon source NLDM_metabolites (C) -0.5 +0.8 -0.2 +0.1 -0.3
nitrogen source L-Serine (N); ShewMM media; no shaking -0.4 +0.6 -0.2 +0.2 -0.4
carbon source Sucrose (C) -0.4 +0.3 +0.1 +0.2 -0.2
nl-ccm_agar NL-CCM_agar +0.5 -0.5 +0.0 -0.0 +0.1
carbon source D,L-Lactate (C) -0.4 +0.4 +0.2 -0.1 -0.0
nl-ccm; high oxygen NL-CCM; high oxygen +0.5 -0.4 -0.1 -0.1 +0.3
nl-ccm; high oxygen NL-CCM; high oxygen +0.5 -0.3 -0.2 -0.0 +0.3
nf_with10percent_fulln NF_with10percent_fullN +0.3 -0.3 +0.0 -0.2 +0.4
nl-ccm; ambient oxygen NL-CCM; ambient oxygen +0.5 -0.3 -0.1 -0.0 +0.3
nln NLN +0.4 +0.2 +0.1 -0.2 +0.3
nl-ccm; ambient oxygen NL-CCM; ambient oxygen +0.6 -0.1 +0.1 -0.0 +0.3
nl-ccm; high oxygen NL-CCM; high oxygen +0.4 +0.3 +0.1 -0.1 +0.4
remove
EX31_RS01325
plot		 remove
EX31_RS01330
plot		 remove
EX31_RS01335		 remove
EX31_RS01340
plot		 remove
EX31_RS01345
plot