Fitness for 5 genes in Rahnella sp. WP5

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500 ntEX31_RS01100 and EX31_RS01105 are separated by 166 nucleotidesEX31_RS01105 and EX31_RS01110 are separated by 943 nucleotidesEX31_RS01110 and EX31_RS01115 are separated by 70 nucleotidesEX31_RS01115 and EX31_RS01120 are separated by 351 nucleotides EX31_RS01100: EX31_RS01100 - hypothetical protein, at 238,902 to 239,081 _RS01100 EX31_RS01105: EX31_RS01105 - tryptophan permease, at 239,248 to 240,492 _RS01105 EX31_RS01110: EX31_RS01110 - hypothetical protein, at 241,436 to 242,170 _RS01110 EX31_RS01115: EX31_RS01115 - ABC-F family ATP-binding cassette domain-containing protein, at 242,241 to 243,974 _RS01115 EX31_RS01120: EX31_RS01120 - MFS transporter, at 244,326 to 245,564 _RS01120
Group Condition EX31_RS01100 EX31_RS01105 EX31_RS01110 EX31_RS01115 EX31_RS01120
carbon source NLDM_metabolites (C) N.D. +0.0 +0.2 -0.6 -1.0
nitrogen source L-Glutamine (N); ShewMM media; no shaking N.D. -0.1 -0.1 -0.7 -0.3
nitrogen source Ammonium chloride (N); ShewMM media; shaking N.D. +0.0 -0.2 -0.5 -0.4
nitrogen source Ammonium chloride (N); RCH2 media; shaking N.D. -0.1 -0.2 -0.1 -0.7
nitrogen source L-Serine (N); RCH2 media; no shaking N.D. -0.0 -0.2 -0.4 -0.5
mixed community NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum N.D. -0.0 -0.1 -0.5 -0.4
nf_with10percent_fulln NF_with10percent_fullN N.D. -0.3 -0.3 -0.2 -0.2
nitrogen source L-Glutamine (N); RCH2 media; no shaking N.D. -0.1 -0.1 -0.3 -0.5
nl-ccm; low oxygen NL-CCM; low oxygen N.D. -0.0 -0.4 -0.3 -0.2
nln NLN N.D. -0.0 -0.3 -0.4 -0.2
nf_with_fulln NF_with_fullN N.D. -0.1 -0.5 -0.1 -0.2
nf_with10percent_fulln NF_with10percent_fullN N.D. -0.3 -0.4 -0.2 +0.1
nl-ccm; high oxygen NL-CCM; high oxygen N.D. -0.1 -0.3 -0.2 -0.2
carbon source NLDM_metabolites (C) N.D. -0.0 +0.0 -0.3 -0.5
nitrogen source L-Glutamine (N); RCH2 media; no shaking N.D. -0.0 -0.8 +0.1 -0.1
nitrogen source Ammonium chloride (N); ShewMM media; shaking N.D. -0.0 -0.3 -0.3 -0.2
nf_with10percent_fulln NF_with10percent_fullN N.D. -0.1 +0.0 -0.6 -0.1
nitrogen source Ammonium chloride (N); RCH2 media; no shaking N.D. +0.1 +0.0 -0.3 -0.5
nitrogen source L-Serine (N); RCH2 media; shaking N.D. -0.0 -0.2 +0.1 -0.5
nl-ccm; vial NL-CCM; vial N.D. +0.0 +0.1 -0.1 -0.6
mgl MGL N.D. +0.0 +0.0 -0.2 -0.5
nitrogen source L-Serine (N); ShewMM media; no shaking N.D. +0.1 -0.3 -0.3 +0.1
nitrogen source L-Serine (N); RCH2 media; no shaking N.D. -0.2 +0.2 +0.2 -0.5
carbon source casaminos (C) N.D. +0.2 -0.0 -0.5 +0.1
nitrogen source Ammonium chloride (N); ShewMM media; no shaking N.D. -0.1 -0.4 +0.6 -0.1
nl-ccm; high oxygen NL-CCM; high oxygen N.D. -0.0 +0.0 -0.4 +0.4
carbon source D-Glucose (C) N.D. -0.0 +0.3 -0.4 +0.3
mixed community NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum N.D. -0.1 +0.5 -0.2 +0.1
carbon source D,L-Lactate (C) N.D. +0.1 +0.1 +0.4 +0.3
carbon source Sucrose (C) N.D. +0.2 +0.4 +0.4 +0.2
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EX31_RS01100
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EX31_RS01105
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EX31_RS01115
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EX31_RS01120
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