Fitness for 5 genes in Rahnella sp. WP5

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500 ntEX31_RS01080 and EX31_RS01085 overlap by 4 nucleotidesEX31_RS01085 and EX31_RS01090 overlap by 4 nucleotidesEX31_RS01090 and EX31_RS01095 overlap by 4 nucleotidesEX31_RS01095 and EX31_RS01100 are separated by 139 nucleotides EX31_RS01080: EX31_RS01080 - metal ABC transporter substrate-binding protein, at 235,343 to 236,284 _RS01080 EX31_RS01085: EX31_RS01085 - ATP-binding cassette domain-containing protein, at 236,281 to 237,060 _RS01085 EX31_RS01090: EX31_RS01090 - metal ABC transporter permease, at 237,057 to 237,911 _RS01090 EX31_RS01095: EX31_RS01095 - metal ABC transporter permease, at 237,908 to 238,762 _RS01095 EX31_RS01100: EX31_RS01100 - hypothetical protein, at 238,902 to 239,081 _RS01100
Group Condition EX31_RS01080 EX31_RS01085 EX31_RS01090 EX31_RS01095 EX31_RS01100
nitrogen source Ammonium chloride (N); RCH2 media; no shaking -0.2 +0.1 -1.1 -0.7 N.D.
nitrogen source L-Serine (N); RCH2 media; shaking -0.1 -0.7 -0.9 +0.0 N.D.
nitrogen source L-Serine (N); RCH2 media; no shaking -0.2 -0.3 -1.6 +0.4 N.D.
mixed community NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum -0.0 -0.9 -0.2 -0.3 N.D.
nitrogen source Ammonium chloride (N); ShewMM media; shaking -0.4 -0.9 -0.3 +0.1 N.D.
nitrogen source L-Glutamine (N); ShewMM media; shaking -0.2 +0.2 -0.9 -0.4 N.D.
carbon source Sucrose (C) +0.1 -0.4 -0.2 -0.8 N.D.
nitrogen source L-Glutamine (N); RCH2 media; no shaking -0.0 -0.6 -0.7 +0.1 N.D.
nitrogen source Ammonium chloride (N); RCH2 media; shaking -0.5 +0.4 -0.9 -0.1 N.D.
nitrogen source L-Serine (N); ShewMM media; no shaking -0.4 -0.0 -0.9 +0.4 N.D.
nl-ccm NL-CCM -0.1 -1.3 +0.5 -0.1 N.D.
nl-ccm; high oxygen NL-CCM; high oxygen +0.3 +0.0 -1.2 -0.0 N.D.
nitrogen source L-Glutamine (N); RCH2 media; no shaking -0.1 +0.2 -1.1 +0.1 N.D.
carbon source D,L-Lactate (C) +0.4 -0.3 -1.3 +0.5 N.D.
nl-ccm; ambient oxygen NL-CCM; ambient oxygen +0.5 -0.4 -0.4 -0.0 N.D.
mgl MGL +0.0 +0.7 -0.5 -0.4 N.D.
carbon source NLDM_metabolites (C) -0.6 +1.9 -0.5 -0.6 N.D.
nln NLN +0.1 +0.9 -0.5 -0.2 N.D.
carbon source D-Xylose (C) -0.1 +0.9 -0.4 -0.1 N.D.
nf_with_fulln NF_with_fullN +0.5 +0.7 -0.6 -0.1 N.D.
nf_with_fulln NF_with_fullN +0.4 +0.9 -0.5 +0.0 N.D.
nf_with_fulln NF_with_fullN +0.5 +0.8 -0.4 +0.2 N.D.
carbon source D,L-Lactate (C) +0.0 +1.3 -0.3 +0.1 N.D.
nf_with10percent_fulln NF_with10percent_fullN +0.6 +0.9 -0.4 +0.1 N.D.
nf_with_fulln NF_with_fullN +0.4 +1.0 -0.4 +0.1 N.D.
nf_with10percent_fulln NF_with10percent_fullN +0.6 +0.9 -0.3 +0.3 N.D.
nf_with_fulln NF_with_fullN +0.4 +0.7 +0.1 +0.3 N.D.
nf_with10percent_fulln NF_with10percent_fullN +0.6 +0.9 +0.2 -0.0 N.D.
nf_with10percent_fulln NF_with10percent_fullN +0.6 +0.9 +0.1 +0.1 N.D.
nf_with10percent_fulln NF_with10percent_fullN +0.6 +1.2 -0.1 +0.2 N.D.
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EX31_RS01080
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EX31_RS01085
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EX31_RS01100
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