Fitness for 5 genes in Rahnella sp. WP5

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500 ntEX31_RS00730 and EX31_RS00735 are separated by 655 nucleotidesEX31_RS00735 and EX31_RS00740 overlap by 4 nucleotidesEX31_RS00740 and EX31_RS00745 overlap by 4 nucleotidesEX31_RS00745 and EX31_RS00755 are separated by 639 nucleotides EX31_RS00730: EX31_RS00730 - aspartate aminotransferase family protein, at 156,111 to 157,583 _RS00730 EX31_RS00735: EX31_RS00735 - mechanosensitive ion channel family protein, at 158,239 to 159,315 _RS00735 EX31_RS00740: EX31_RS00740 - malto-oligosyltrehalose synthase, at 159,312 to 161,822 _RS00740 EX31_RS00745: EX31_RS00745 - malto-oligosyltrehalose trehalohydrolase, at 161,819 to 163,606 _RS00745 EX31_RS00755: EX31_RS00755 - ABC transporter substrate-binding protein, at 164,246 to 165,352 _RS00755
Group Condition EX31_RS00730 EX31_RS00735 EX31_RS00740 EX31_RS00745 EX31_RS00755
carbon source casaminos (C) -0.5 -0.3 -0.7 -0.1 -0.1
nf_with_fulln NF_with_fullN -0.2 -1.1 +0.1 -0.5 -0.0
nf_with_fulln NF_with_fullN -0.2 -0.5 +0.1 -0.3 -0.1
nf_with_fulln NF_with_fullN -0.3 -0.5 -0.1 -0.2 -0.0
nf_with_fulln NF_with_fullN -0.3 -0.3 +0.0 -0.3 -0.1
nitrogen source L-Glutamine (N); ShewMM media; no shaking -0.3 -0.3 -0.1 -0.3 -0.0
nf_with_fulln NF_with_fullN -0.3 -0.2 -0.1 -0.3 -0.1
nln NLN -0.0 -0.3 +0.0 -0.4 -0.2
nf_with_fulln NF_with_fullN -0.3 -0.3 -0.1 -0.2 -0.0
mgl MGL -0.0 -0.5 -0.1 -0.3 +0.1
carbon source NLDM_metabolites (C) +0.0 -0.4 -0.5 +0.4 -0.2
carbon source D,L-Lactate (C) +0.2 -0.2 -0.3 -0.1 -0.2
mgl MGL -0.5 +0.3 +0.1 -0.2 -0.1
nl-ccm; high oxygen NL-CCM; high oxygen +0.2 -0.6 +0.1 -0.1 -0.1
nl-ccm; ambient oxygen NL-CCM; ambient oxygen +0.3 -0.2 -0.2 -0.2 -0.1
nf_with10percent_fulln NF_with10percent_fullN +0.3 -0.2 -0.2 -0.2 +0.1
nitrogen source L-Serine (N); RCH2 media; shaking -0.1 +0.3 +0.1 -0.2 -0.3
nitrogen source Ammonium chloride (N); ShewMM media; no shaking -0.0 -0.5 +0.2 +0.2 +0.1
nl-ccm; ambient oxygen NL-CCM; ambient oxygen +0.3 +0.1 -0.0 -0.3 -0.2
nl-ccm; ambient oxygen NL-CCM; ambient oxygen +0.4 -0.1 +0.1 -0.3 -0.1
nitrogen source Ammonium chloride (N); ShewMM media; no shaking -0.3 +0.6 -0.0 -0.1 -0.0
nitrogen source Ammonium chloride (N); RCH2 media; shaking -0.2 +0.2 +0.0 +0.4 -0.1
nitrogen source Ammonium chloride (N); RCH2 media; shaking -0.4 +0.6 +0.1 +0.1 -0.0
carbon source D-Xylose (C) +0.4 +0.2 -0.2 +0.0 -0.1
carbon source D-Glucose (C) +0.2 -0.2 -0.1 +0.3 +0.3
carbon source D-Mannitol (C) +0.5 -0.1 -0.1 +0.2 +0.1
carbon source D-Mannitol (C) +0.4 -0.2 -0.3 +0.4 +0.3
nitrogen source L-Glutamine (N); ShewMM media; no shaking +0.0 +0.4 -0.2 +0.5 +0.0
nitrogen source L-Serine (N); RCH2 media; shaking +0.1 +0.3 -0.0 +0.5 +0.1
nitrogen source L-Serine (N); RCH2 media; shaking -0.0 +0.3 +0.3 +0.4 +0.1
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EX31_RS00730
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EX31_RS00735
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EX31_RS00745
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EX31_RS00755
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