Fitness for 5 genes in Rahnella sp. WP5

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 123 experiments or choose conditions or try the comparative fitness browser

500 ntEX31_RS00360 and EX31_RS00365 are separated by 41 nucleotidesEX31_RS00365 and EX31_RS00370 overlap by 4 nucleotidesEX31_RS00370 and EX31_RS00375 overlap by 29 nucleotidesEX31_RS00375 and EX31_RS00380 are separated by 24 nucleotides EX31_RS00360: EX31_RS00360 - ABC transporter substrate-binding protein, at 75,604 to 77,199 _RS00360 EX31_RS00365: EX31_RS00365 - ABC transporter permease, at 77,241 to 78,257 _RS00365 EX31_RS00370: EX31_RS00370 - ABC transporter permease, at 78,254 to 79,159 _RS00370 EX31_RS00375: EX31_RS00375 - ABC transporter ATP-binding protein, at 79,131 to 79,997 _RS00375 EX31_RS00380: EX31_RS00380 - ABC transporter ATP-binding protein, at 80,022 to 80,792 _RS00380
Group Condition EX31_RS00360 EX31_RS00365 EX31_RS00370 EX31_RS00375 EX31_RS00380
carbon source D,L-Lactate (C) -0.0 +0.1 -0.3 -0.0 -1.9
carbon source NLDM_metabolites (C) -0.6 +0.1 -0.2 +0.1 -0.8
mgl MGL +0.1 +0.0 -0.3 -0.6 -0.7
nitrogen source L-Serine (N); RCH2 media; shaking -0.5 +0.1 -0.2 -0.2 -0.5
carbon source casaminos (C) -0.1 -0.5 +0.0 -0.3 -0.5
mixed community NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum -0.2 -0.2 -0.1 +0.0 -0.9
nitrogen source Ammonium chloride (N); RCH2 media; shaking +0.2 -0.4 -0.6 -0.0 -0.5
carbon source Sucrose (C) -0.0 -0.1 +0.1 -0.4 -0.8
nl-ccm; high oxygen NL-CCM; high oxygen +0.0 +0.0 +0.1 -0.2 -1.1
nln NLN -0.1 -0.0 +0.1 -0.1 -0.9
nitrogen source Ammonium chloride (N); RCH2 media; no shaking +0.1 +0.1 -0.1 -0.2 -0.9
nl-ccm; ambient oxygen NL-CCM; ambient oxygen -0.1 -0.0 +0.2 -0.1 -1.0
nitrogen source L-Serine (N); RCH2 media; no shaking -0.1 +0.2 -0.4 -0.2 -0.5
mixed community NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum -0.2 +0.1 -0.3 +0.1 -0.6
mixed community NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum +0.0 +0.2 -0.1 -0.2 -0.6
mgl MGL +0.4 -0.2 -0.1 -0.0 -0.7
mixed community NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum +0.3 -0.3 +0.1 -0.2 -0.5
mixed community NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum +0.3 +0.0 -0.2 -0.1 -0.7
nl-ccm NL-CCM +0.2 -0.1 +0.2 -0.1 -0.7
nf_with10percent_fulln NF_with10percent_fullN -0.1 +0.3 +0.2 -0.2 -0.8
carbon source Sucrose (C) +0.1 -0.1 +0.0 +0.2 -0.8
nf_with10percent_fulln NF_with10percent_fullN +0.1 +0.2 +0.1 -0.2 -0.7
nln NLN +0.1 +0.2 +0.0 -0.4 -0.3
nf_with_fulln NF_with_fullN +0.3 +0.2 +0.2 -0.2 -0.8
carbon source D-Xylose (C) -0.1 -0.2 +0.4 -0.3 -0.2
nitrogen source L-Glutamine (N); RCH2 media; no shaking -0.4 +0.3 -0.2 -0.3 +0.2
carbon source D,L-Lactate (C) -0.1 -0.2 +0.5 +0.1 -0.4
carbon source casaminos (C) +0.3 +0.3 -0.1 -0.0 -0.6
nf_with10percent_fulln NF_with10percent_fullN +0.2 +0.2 +0.2 -0.3 -0.4
nitrogen source L-Serine (N); ShewMM media; no shaking -0.3 -0.2 +0.1 +0.3 +0.5
remove
EX31_RS00360
plot		 remove
EX31_RS00365
plot		 remove
EX31_RS00370		 remove
EX31_RS00375
plot		 remove
EX31_RS00380
plot