Fitness for 5 genes in Rahnella sp. WP5

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500 ntEX31_RS00325 and EX31_RS25025 are separated by 198 nucleotidesEX31_RS25025 and EX31_RS00330 are separated by 212 nucleotidesEX31_RS00330 and EX31_RS00335 are separated by 97 nucleotidesEX31_RS00335 and EX31_RS00340 are separated by 39 nucleotides EX31_RS00325: EX31_RS00325 - hypothetical protein, at 68,339 to 68,983 _RS00325 EX31_RS25025: EX31_RS25025 - DUF1272 domain-containing protein, at 69,182 to 69,421 _RS25025 EX31_RS00330: EX31_RS00330 - drug:proton antiporter, at 69,634 to 70,005 _RS00330 EX31_RS00335: EX31_RS00335 - YafY family transcriptional regulator, at 70,103 to 70,792 _RS00335 EX31_RS00340: EX31_RS00340 - MFS transporter, at 70,832 to 72,253 _RS00340
Group Condition EX31_RS00325 EX31_RS25025 EX31_RS00330 EX31_RS00335 EX31_RS00340
nitrogen source Ammonium chloride (N); ShewMM media; shaking +0.3 -1.7 -0.8 -0.4 +0.2
carbon source NLDM_metabolites (C) -0.2 -0.4 -0.4 -0.4 -0.5
carbon source Sucrose (C) +0.0 -1.3 -0.2 -0.2 -0.0
nitrogen source L-Glutamine (N); RCH2 media; shaking +0.2 -0.8 -0.9 -0.1 +0.2
carbon source D,L-Lactate (C) -0.1 -0.4 +0.2 -0.1 -0.9
nitrogen source L-Serine (N); RCH2 media; no shaking +0.2 -1.4 -0.0 -0.3 +0.3
nitrogen source L-Serine (N); RCH2 media; no shaking +0.2 -1.3 -0.2 -0.1 +0.1
carbon source casaminos (C) +0.1 -1.0 -0.1 +0.1 -0.1
nitrogen source L-Serine (N); RCH2 media; shaking +0.1 -0.9 +0.1 -0.1 -0.1
nitrogen source Ammonium chloride (N); RCH2 media; no shaking -0.2 -0.9 +0.0 +0.2 -0.1
nl-ccm NL-CCM -0.1 -0.7 +0.1 -0.2 +0.2
mixed community NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum +0.0 -0.7 -0.4 +0.2 +0.2
carbon source NLDM_metabolites (C) +0.2 -0.9 +0.3 -0.2 +0.1
mgl MGL -0.1 -0.7 -0.1 +0.2 +0.4
nitrogen source L-Serine (N); RCH2 media; shaking +0.1 +0.6 -0.3 +0.0 -0.4
nitrogen source Ammonium chloride (N); ShewMM media; shaking +0.2 -0.4 +0.2 -0.3 +0.3
carbon source Sucrose (C) -0.2 +0.6 +0.3 -0.2 -0.3
nl-ccm; ambient oxygen NL-CCM; ambient oxygen +0.1 +0.5 -0.5 -0.2 +0.2
nf_with_fulln NF_with_fullN -0.1 +0.5 -0.1 -0.3 +0.3
nitrogen source L-Glutamine (N); ShewMM media; no shaking +0.1 +0.8 -0.1 -0.4 -0.1
nitrogen source L-Serine (N); ShewMM media; no shaking +0.0 +1.0 -0.1 -0.3 -0.1
nf_with_fulln NF_with_fullN -0.2 +0.8 +0.0 -0.2 +0.2
nitrogen source L-Serine (N); RCH2 media; shaking +0.2 +0.5 +0.5 -0.1 -0.3
nitrogen source L-Serine (N); ShewMM media; shaking +0.0 +1.1 -0.2 +0.0 -0.2
nitrogen source Ammonium chloride (N); ShewMM media; no shaking +0.2 +0.4 +0.7 -0.1 -0.2
nf_with_fulln NF_with_fullN -0.1 +1.0 +0.1 -0.1 +0.2
nf_with_fulln NF_with_fullN -0.2 +1.0 +0.1 -0.2 +0.4
nitrogen source L-Glutamine (N); RCH2 media; shaking +0.0 +0.9 +0.2 +0.1 -0.1
nitrogen source L-Serine (N); ShewMM media; shaking +0.1 +0.8 +0.5 -0.2 -0.0
carbon source D-Glucose (C) +0.1 +0.1 +0.7 +0.2 +0.2
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EX31_RS00325
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