Fitness for 5 genes in Rahnella sp. WP5

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500 ntEX31_RS00250 and EX31_RS00255 are separated by 71 nucleotidesEX31_RS00255 and EX31_RS00260 are separated by 141 nucleotidesEX31_RS00260 and EX31_RS00265 are separated by 21 nucleotidesEX31_RS00265 and EX31_RS00270 are separated by 787 nucleotides EX31_RS00250: EX31_RS00250 - aldehyde dehydrogenase, at 51,730 to 53,169 _RS00250 EX31_RS00255: EX31_RS00255 - hypothetical protein, at 53,241 to 53,822 _RS00255 EX31_RS00260: EX31_RS00260 - hypothetical protein, at 53,964 to 55,040 _RS00260 EX31_RS00265: EX31_RS00265 - alpha/beta hydrolase, at 55,062 to 55,820 _RS00265 EX31_RS00270: EX31_RS00270 - TonB-dependent receptor, at 56,608 to 58,761 _RS00270
Group Condition EX31_RS00250 EX31_RS00255 EX31_RS00260 EX31_RS00265 EX31_RS00270
nitrogen source Ammonium chloride (N); ShewMM media; shaking +0.0 -0.0 -0.7 -0.6 -0.3
carbon source D-Xylose (C) -0.1 -0.3 -0.3 -0.7 -0.2
carbon source D-Xylose (C) -0.3 -0.3 +0.1 -0.4 -0.1
carbon source D,L-Lactate (C) -0.6 -0.1 -0.2 -0.0 -0.1
nitrogen source Ammonium chloride (N); ShewMM media; shaking -0.3 +0.0 -0.3 -0.0 -0.3
nitrogen source Ammonium chloride (N); RCH2 media; no shaking -0.0 +0.0 -0.4 -0.3 -0.1
nitrogen source L-Serine (N); RCH2 media; shaking -0.1 -0.4 +0.1 -0.1 -0.2
carbon source D-Mannitol (C) -0.3 -0.2 -0.2 +0.0 -0.1
nitrogen source L-Serine (N); RCH2 media; shaking +0.1 -0.2 -0.2 -0.1 -0.2
nitrogen source L-Serine (N); RCH2 media; shaking -0.2 +0.4 -0.2 -0.2 -0.2
nitrogen source L-Serine (N); RCH2 media; no shaking -0.5 +0.1 +0.1 -0.1 -0.0
nl-ccm; high oxygen NL-CCM; high oxygen +0.0 -0.5 +0.2 -0.3 +0.2
nitrogen source L-Serine (N); ShewMM media; no shaking -0.1 +0.3 -0.2 -0.2 -0.1
mixed community NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum -0.0 +0.3 -0.2 -0.3 -0.1
nitrogen source L-Serine (N); ShewMM media; shaking -0.2 +0.3 +0.0 -0.3 -0.1
mixed community NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum +0.3 -0.7 +0.2 +0.0 +0.1
carbon source Sucrose (C) +0.1 +0.4 -0.4 -0.2 -0.0
nl-ccm NL-CCM +0.1 -0.3 +0.2 -0.2 +0.1
nitrogen source L-Serine (N); ShewMM media; no shaking -0.2 +0.3 +0.2 -0.1 -0.2
nitrogen source L-Serine (N); RCH2 media; no shaking +0.0 +0.4 -0.2 +0.1 -0.1
nl-ccm; ambient oxygen NL-CCM; ambient oxygen +0.1 -0.4 +0.2 +0.0 +0.2
nf_with_fulln NF_with_fullN -0.2 +0.3 +0.1 +0.0 +0.2
carbon source casaminos (C) -0.1 +0.1 -0.1 +0.3 +0.2
carbon source NLDM_metabolites (C) -0.1 +0.3 +0.3 -0.1 +0.2
carbon source NLDM_metabolites (C) +0.0 +0.6 +0.2 -0.1 -0.1
nf_with_fulln NF_with_fullN -0.1 +0.2 +0.2 +0.1 +0.2
nl-ccm; ambient oxygen NL-CCM; ambient oxygen +0.2 +0.1 +0.3 +0.1 +0.2
nf_with10percent_fulln NF_with10percent_fullN -0.0 +0.4 +0.3 -0.0 +0.2
mgl MGL +0.2 +0.2 +0.3 +0.1 -0.0
nf_with_fulln NF_with_fullN -0.0 +0.5 +0.1 +0.1 +0.2
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EX31_RS00250
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EX31_RS00255
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EX31_RS00265
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EX31_RS00270
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