Fitness for 5 genes in Escherichia coli Nissle 1917

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500 ntECOLIN_RS24690 and ECOLIN_RS24695 are separated by 353 nucleotidesECOLIN_RS24695 and ECOLIN_RS33120 are separated by 153 nucleotidesECOLIN_RS33120 and ECOLIN_RS24700 are separated by 62 nucleotidesECOLIN_RS24700 and ECOLIN_RS24705 overlap by 1 nucleotides ECOLIN_RS24690: ECOLIN_RS24690 - DNA polymerase III subunit chi, at 4,967,533 to 4,967,976 _RS24690 ECOLIN_RS24695: ECOLIN_RS24695 - leucyl aminopeptidase, at 4,968,330 to 4,969,841 _RS24695 ECOLIN_RS33120: ECOLIN_RS33120 - protein YtgA, at 4,969,995 to 4,970,045 _RS33120 ECOLIN_RS24700: ECOLIN_RS24700 - LPS export ABC transporter permease LptF, at 4,970,108 to 4,971,208 _RS24700 ECOLIN_RS24705: ECOLIN_RS24705 - LPS export ABC transporter permease LptG, at 4,971,208 to 4,972,290 _RS24705
Group Condition ECOLIN_RS24690 ECOLIN_RS24695 ECOLIN_RS33120 ECOLIN_RS24700 ECOLIN_RS24705
phage Phi92 -3.5 -0.2 -0.4 N.D. N.D.
carbon source Sodium-DL-Lactate -4.1 +0.1 +0.0 N.D. N.D.
carbon source Casamino-acids -4.4 +0.2 +0.1 N.D. N.D.
carbon source Casamino-acids -3.7 -0.2 +0.1 N.D. N.D.
carbon source L-Arabinose -3.6 -0.1 +0.1 N.D. N.D.
carbon source L-Arabinose -3.3 +0.1 +0.0 N.D. N.D.
phage Phi92 -2.4 -0.1 -0.5 N.D. N.D.
carbon source D-Glucose -3.1 +0.3 -0.1 N.D. N.D.
phage JK16 -2.2 +0.0 -0.5 N.D. N.D.
phage Bas44 -1.5 -0.7 -0.5 N.D. N.D.
carbon source Sodium-DL-Lactate -2.9 -0.0 +0.3 N.D. N.D.
carbon source D-Glucose -2.7 +0.1 +0.2 N.D. N.D.
phage Bas10 -1.7 -0.1 -0.3 N.D. N.D.
phage RB51 -1.0 -0.3 -0.8 N.D. N.D.
phage Bas44 -0.9 -0.5 -0.6 N.D. N.D.
phage P1vir -0.6 -0.0 -1.1 N.D. N.D.
phage Bas10 -1.1 -0.0 -0.5 N.D. N.D.
phage Bas04 -1.8 +0.1 +0.1 N.D. N.D.
phage Bas05 -1.1 +0.1 -0.5 N.D. N.D.
phage JK38 -1.1 +0.3 -0.6 N.D. N.D.
carbon source L-Rhamnose -1.9 +0.5 -0.0 N.D. N.D.
no phage control Control_Nissle -1.4 +0.3 -0.1 N.D. N.D.
phage TP7 -1.7 +0.5 +0.0 N.D. N.D.
phage Bas31 -1.2 +0.4 -0.3 N.D. N.D.
phage Bas31 -1.6 +0.6 +0.0 N.D. N.D.
phage JK38 -0.4 +0.6 -1.0 N.D. N.D.
phage Bas37 -0.5 +0.7 -0.6 N.D. N.D.
phage Bas21 -1.1 +0.8 +0.2 N.D. N.D.
phage Bas21 -1.1 +0.7 +0.3 N.D. N.D.
phage Bas22 +0.4 +0.6 -1.0 N.D. N.D.
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