Fitness for 5 genes in Escherichia coli Nissle 1917

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500 ntECOLIN_RS30360 and ECOLIN_RS32140 are separated by 216 nucleotidesECOLIN_RS32140 and ECOLIN_RS32255 are separated by 48 nucleotidesECOLIN_RS32255 and ECOLIN_RS01880 are separated by 262 nucleotidesECOLIN_RS01880 and ECOLIN_RS27700 are separated by 70 nucleotides ECOLIN_RS30360: ECOLIN_RS30360 - IS1 family transposase, at 375,073 to 375,766 _RS30360 ECOLIN_RS32140: ECOLIN_RS32140 - integrase, at 375,983 to 376,141 _RS32140 ECOLIN_RS32255: ECOLIN_RS32255 - hypothetical protein, at 376,190 to 376,327 _RS32255 ECOLIN_RS01880: ECOLIN_RS01880 - YagU family protein, at 376,590 to 377,204 _RS01880 ECOLIN_RS27700: ECOLIN_RS27700 - tail fiber assembly protein, at 377,275 to 377,441 _RS27700
Group Condition ECOLIN_RS30360 ECOLIN_RS32140 ECOLIN_RS32255 ECOLIN_RS01880 ECOLIN_RS27700
phage Bas63 +0.0 N.D. N.D. -0.5 -1.7
phage Bas22 -0.0 N.D. N.D. -0.7 -1.4
phage EV219 -0.4 N.D. N.D. +0.5 -2.2
phage Bas31 -0.3 N.D. N.D. -0.8 -0.5
phage Phi92 -0.3 N.D. N.D. -0.0 -0.8
phage Bas68 -0.4 N.D. N.D. -0.4 -0.2
carbon source L-Rhamnose -0.5 N.D. N.D. +0.2 -0.5
phage K25 +0.1 N.D. N.D. -0.4 -0.5
phage Bas27 -0.1 N.D. N.D. +0.3 -1.0
carbon source Casamino-acids +0.1 N.D. N.D. +0.0 -0.9
phage Bas31 +0.1 N.D. N.D. -0.5 -0.4
phage Bas52 +0.6 N.D. N.D. -0.2 -1.1
phage Bas22 -0.7 N.D. N.D. -0.3 +0.4
phage Bas27 -0.4 N.D. N.D. +0.6 -0.8
phage Bas38 +0.5 N.D. N.D. -0.2 -0.6
carbon source L-Rhamnose -0.3 N.D. N.D. -0.8 +0.9
carbon source L-Arabinose +0.1 N.D. N.D. -0.5 +0.4
phage JK16 +0.3 N.D. N.D. -0.4 +0.2
carbon source D-Glucose +0.5 N.D. N.D. +0.8 -0.5
phage RB51 +0.2 N.D. N.D. -0.1 +0.6
phage Bas51 -0.5 N.D. N.D. +0.1 +1.2
phage K20 +0.5 N.D. N.D. -0.1 +0.4
phage CEV1 +0.8 N.D. N.D. +0.2 -0.1
carbon source Sodium-DL-Lactate +0.4 N.D. N.D. -0.3 +0.8
phage Bas48 +0.6 N.D. N.D. -0.0 +0.5
phage Bas45 -0.1 N.D. N.D. +0.2 +0.9
phage Bas10 +0.6 N.D. N.D. +0.3 +0.3
no phage control Control_Nissle -0.3 N.D. N.D. +0.5 +1.0
phage Bas44 +0.2 N.D. N.D. +0.2 +0.8
carbon source L-Arabinose -0.0 N.D. N.D. +0.3 +1.1
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