Fitness for 5 genes in Escherichia coli Nissle 1917

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500 ntECOLIN_RS12185 and ECOLIN_RS12190 overlap by 4 nucleotidesECOLIN_RS12190 and ECOLIN_RS31520 are separated by 217 nucleotidesECOLIN_RS31520 and ECOLIN_RS31525 are separated by 271 nucleotidesECOLIN_RS31525 and ECOLIN_RS12195 are separated by 278 nucleotides ECOLIN_RS12185: ECOLIN_RS12185 - protein-serine/threonine phosphatase PphC, at 2,411,480 to 2,412,241 _RS12185 ECOLIN_RS12190: ECOLIN_RS12190 - VWA domain-containing protein, at 2,412,238 to 2,412,897 _RS12190 ECOLIN_RS31520: ECOLIN_RS31520 - type I toxin-antitoxin system Ibs family toxin, at 2,413,115 to 2,413,171 _RS31520 ECOLIN_RS31525: ECOLIN_RS31525 - type I toxin-antitoxin system Ibs family toxin, at 2,413,443 to 2,413,499 _RS31525 ECOLIN_RS12195: ECOLIN_RS12195 - multidrug efflux RND transporter subunit MdtA, at 2,413,778 to 2,415,025 _RS12195
Group Condition ECOLIN_RS12185 ECOLIN_RS12190 ECOLIN_RS31520 ECOLIN_RS31525 ECOLIN_RS12195
carbon source L-Rhamnose N.D. N.D. N.D. -0.2 -3.3
carbon source Sodium-DL-Lactate N.D. N.D. N.D. -0.1 -2.6
phage Bas52 N.D. N.D. N.D. -1.0 -1.5
phage CEV1 N.D. N.D. N.D. +0.4 -2.7
phage Bas51 N.D. N.D. N.D. -0.1 -1.7
carbon source D-Glucose N.D. N.D. N.D. -0.8 -0.9
carbon source L-Arabinose N.D. N.D. N.D. +0.3 -2.0
phage Phi92 N.D. N.D. N.D. -0.8 -0.6
carbon source Sodium-DL-Lactate N.D. N.D. N.D. +0.0 -1.3
phage Bas37 N.D. N.D. N.D. +0.2 -1.1
phage Bas31 N.D. N.D. N.D. +0.0 -0.9
carbon source Casamino-acids N.D. N.D. N.D. +0.1 -0.8
phage EV219 N.D. N.D. N.D. +0.3 -0.8
phage Bas05 N.D. N.D. N.D. +0.3 -0.6
phage JK38 N.D. N.D. N.D. +0.7 -0.9
phage Bas31 N.D. N.D. N.D. -0.3 +0.4
phage TP7 N.D. N.D. N.D. +0.7 -0.3
phage Bas27 N.D. N.D. N.D. +0.7 -0.2
phage RB51 N.D. N.D. N.D. -0.5 +0.9
phage Bas22 N.D. N.D. N.D. -0.5 +1.0
phage K25 N.D. N.D. N.D. -0.2 +0.8
phage Bas45 N.D. N.D. N.D. +0.1 +0.6
phage Bas37 N.D. N.D. N.D. +0.5 +0.4
phage Bas44 N.D. N.D. N.D. -0.1 +1.0
phage RB51 N.D. N.D. N.D. -0.0 +1.0
carbon source Casamino-acids N.D. N.D. N.D. +0.2 +0.7
phage CEV1 N.D. N.D. N.D. +0.3 +0.8
phage Bas44 N.D. N.D. N.D. +0.1 +1.0
phage K25 N.D. N.D. N.D. +0.2 +1.0
phage JK16 N.D. N.D. N.D. +0.3 +1.0
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