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Protein
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Fitness for 5 genes in
Escherichia coli Nissle 1917
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ECOLIN_RS26990 and ECOLIN_RS26995 are separated by 103 nucleotides
ECOLIN_RS26995 and ECOLIN_RS27000 are separated by 30 nucleotides
ECOLIN_RS27000 and ECOLIN_RS27005 are separated by 9 nucleotides
ECOLIN_RS27005 and ECOLIN_RS33515 are separated by 799 nucleotides
ECOLIN_RS26990: ECOLIN_RS26990 - GRP family sugar transporter, at 5,401,409 to 5,402,413
_RS26990
ECOLIN_RS26995: ECOLIN_RS26995 - L-fuculose-phosphate aldolase, at 5,402,517 to 5,403,158
_RS26995
ECOLIN_RS27000: ECOLIN_RS27000 - S-methyl-5-thioribose-1-phosphate isomerase, at 5,403,189 to 5,404,304
_RS27000
ECOLIN_RS27005: ECOLIN_RS27005 - S-methyl-5-thioribose kinase, at 5,404,314 to 5,405,573
_RS27005
ECOLIN_RS33515: ECOLIN_RS33515 - glycosyltransferase family 2 protein, at 5,406,373 to 5,406,627
_RS33515
Group
Condition
ECOLIN
_RS26990
ECOLIN
_RS26995
ECOLIN
_RS27000
ECOLIN
_RS27005
ECOLIN
_RS33515
phage
Bas22
-0.5
-0.1
-0.2
-0.0
-0.2
carbon source
Sodium-DL-Lactate
-0.4
-0.1
+0.0
-0.1
-0.3
phage
Bas48
-0.3
-0.0
-0.1
-0.0
-0.4
phage
Phi92
-0.3
+0.2
-0.1
-0.1
-0.5
phage
Bas10
-0.2
+0.0
-0.2
+0.0
-0.3
phage
Bas44
-0.0
-0.1
-0.2
+0.1
-0.5
phage
Bas52
-0.5
-0.0
+0.2
-0.1
-0.1
phage
K20
+0.5
-0.0
-0.4
-0.3
-0.2
carbon source
D-Glucose
-0.5
+0.0
+0.1
-0.1
+0.4
phage
Bas68
+0.4
-0.0
-0.0
+0.0
-0.3
carbon source
L-Rhamnose
-0.6
+0.1
+0.3
+0.3
-0.1
phage
EV219
-0.3
-0.0
-0.0
+0.2
+0.3
phage
Bas63
+0.3
-0.0
-0.2
-0.1
+0.3
phage
Bas05
+0.2
-0.1
-0.1
+0.1
+0.2
carbon source
L-Rhamnose
-0.1
-0.3
+0.1
+0.1
+0.5
phage
JK16
+0.1
-0.2
+0.1
-0.0
+0.3
phage
Bas37
-0.2
-0.0
+0.1
+0.2
+0.3
phage
Bas31
-0.0
-0.1
-0.1
+0.0
+0.5
phage
Bas21
+0.2
+0.0
-0.3
+0.2
+0.4
phage
K25
+0.3
+0.0
-0.2
+0.2
+0.2
phage
Bas51
+0.5
+0.0
-0.2
+0.0
+0.2
phage
JK38
+0.2
+0.1
-0.1
+0.2
+0.2
phage
TP7
-0.2
+0.1
+0.1
+0.2
+0.5
phage
JK38
-0.1
+0.1
+0.0
+0.1
+0.7
phage
Bas38
+0.1
+0.2
-0.1
+0.2
+0.6
phage
RB51
+0.4
+0.2
+0.1
+0.1
+0.3
phage
Bas37
+0.3
+0.0
+0.0
+0.2
+0.6
phage
Bas45
+0.3
+0.1
+0.3
+0.1
+0.5
phage
TP7
+0.4
+0.1
+0.2
+0.2
+0.4
phage
Bas38
+0.6
+0.2
+0.1
+0.3
+0.6
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