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Protein
Homologs
Fitness for 5 genes in
Escherichia coli Nissle 1917
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ECOLIN_RS24755 and ECOLIN_RS24765 are separated by 480 nucleotides
ECOLIN_RS24765 and ECOLIN_RS24770 are separated by 64 nucleotides
ECOLIN_RS24770 and ECOLIN_RS24775 are separated by 36 nucleotides
ECOLIN_RS24775 and ECOLIN_RS24780 are separated by 66 nucleotides
ECOLIN_RS24755: ECOLIN_RS24755 - type 1 fimbria switch DNA invertase FimE, at 4,981,488 to 4,982,084
_RS24755
ECOLIN_RS24765: ECOLIN_RS24765 - type 1 fimbrial major subunit FimA, at 4,982,565 to 4,983,113
_RS24765
ECOLIN_RS24770: ECOLIN_RS24770 - fimbrial protein, at 4,983,178 to 4,983,717
_RS24770
ECOLIN_RS24775: ECOLIN_RS24775 - type 1 fimbria chaperone FimC, at 4,983,754 to 4,984,479
_RS24775
ECOLIN_RS24780: ECOLIN_RS24780 - fimbrial usher FimD, at 4,984,546 to 4,987,182
_RS24780
Group
Condition
ECOLIN
_RS24755
ECOLIN
_RS24765
ECOLIN
_RS24770
ECOLIN
_RS24775
ECOLIN
_RS24780
phage
Bas22
-0.5
-0.0
+0.2
-1.6
+0.2
carbon source
D-Glucose
-0.4
-0.4
-0.0
-0.6
+0.1
phage
RB51
-0.8
+0.2
-0.1
-0.6
+0.1
phage
Bas05
+0.2
+0.0
-0.0
-1.3
+0.2
phage
EV219
-0.3
+0.3
+0.1
-0.9
-0.1
phage
Bas31
-0.6
+0.6
-0.5
-0.4
+0.1
phage
Bas10
+0.2
+0.2
-0.1
-1.0
-0.1
carbon source
L-Arabinose
-0.8
+0.7
-0.3
-0.5
+0.1
phage
Bas37
-0.4
+0.5
-0.0
-0.7
+0.1
phage
Bas52
+0.5
+0.2
-0.1
-0.8
-0.2
phage
Bas38
-0.8
+0.5
+0.3
-0.3
+0.0
phage
Bas27
-0.3
-0.1
+0.6
-0.5
+0.1
phage
Bas44
+0.3
+0.6
-0.8
-0.2
+0.1
phage
Bas45
-0.5
+0.4
+0.5
-0.8
+0.3
carbon source
Casamino-acids
+0.3
+0.5
-0.1
-0.7
+0.0
phage
RB68
+1.0
+0.1
-0.6
-0.5
+0.2
phage
Bas52
+0.4
+0.3
-0.6
+0.0
+0.1
phage
JK16
+0.5
+0.1
+0.5
-0.7
+0.1
carbon source
L-Rhamnose
+0.5
-0.7
+0.3
+0.3
+0.1
phage
Bas31
+0.1
+0.6
+0.3
-0.5
+0.1
phage
JK16
-0.1
+0.6
-0.3
+0.4
+0.1
phage
CEV1
-0.1
+0.9
+0.1
-0.3
+0.3
phage
P1vir
+0.8
-0.3
+0.3
+0.2
+0.0
phage
K25
-0.6
+0.5
+0.4
+0.5
+0.1
carbon source
L-Arabinose
+0.3
+0.7
-0.4
+0.2
+0.2
phage
Phi92
-0.3
+0.3
+0.4
+0.6
+0.1
phage
K20
+0.6
-0.2
+0.3
+0.3
+0.1
phage
RB51
+0.3
+0.5
-0.2
+0.7
+0.0
phage
K20
+0.1
+0.2
+0.2
+0.9
+0.0
carbon source
L-Rhamnose
-0.8
+0.4
+0.8
+1.3
-0.0
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