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Protein
Homologs
Fitness for 5 genes in
Escherichia coli Nissle 1917
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ECOLIN_RS24490 and ECOLIN_RS24495 are separated by 77 nucleotides
ECOLIN_RS24495 and ECOLIN_RS24500 are separated by 322 nucleotides
ECOLIN_RS24500 and ECOLIN_RS24510 are separated by 205 nucleotides
ECOLIN_RS24510 and ECOLIN_RS24515 overlap by 4 nucleotides
ECOLIN_RS24490: ECOLIN_RS24490 - DUF1107 domain-containing protein, at 4,920,345 to 4,920,551
_RS24490
ECOLIN_RS24495: ECOLIN_RS24495 - hemolysin family protein, at 4,920,629 to 4,921,972
_RS24495
ECOLIN_RS24500: ECOLIN_RS24500 - peptide-methionine (S)-S-oxide reductase MsrA, at 4,922,295 to 4,922,933
_RS24500
ECOLIN_RS24510: ECOLIN_RS24510 - autotransporter assembly complex protein TamA, at 4,923,139 to 4,924,872
_RS24510
ECOLIN_RS24515: ECOLIN_RS24515 - autotransporter assembly complex protein TamB, at 4,924,869 to 4,928,648
_RS24515
Group
Condition
ECOLIN
_RS24490
ECOLIN
_RS24495
ECOLIN
_RS24500
ECOLIN
_RS24510
ECOLIN
_RS24515
phage
Bas38
-0.2
-0.2
-0.2
-2.1
-1.7
phage
Bas38
-0.0
-0.2
-0.0
-1.6
-1.2
phage
TP7
-0.4
-0.2
-0.0
-1.2
-0.9
phage
Bas45
-0.4
-0.3
-0.2
-0.9
-0.6
phage
TP7
-0.3
+0.0
-0.0
-1.2
-1.0
phage
EV219
-0.6
+0.1
-0.1
-0.8
-0.6
phage
Bas44
-0.5
-0.4
-0.3
-0.3
-0.4
phage
Bas37
-0.1
+0.0
-0.1
-0.8
-0.8
phage
JK38
-0.0
+0.1
-0.2
-0.8
-0.6
phage
Bas37
-0.1
+0.0
+0.1
-0.8
-0.7
phage
JK38
+0.0
-0.1
+0.1
-0.9
-0.6
phage
CEV1
-0.2
-0.1
-0.5
-0.3
-0.4
phage
Bas44
-0.1
-0.3
-0.3
-0.4
-0.3
phage
EV219
-0.0
-0.0
+0.1
-0.8
-0.5
phage
Bas05
-0.1
-0.2
-0.3
-0.4
-0.2
phage
Bas21
-0.2
+0.0
-0.0
-0.5
-0.5
phage
Bas31
+0.0
-0.1
-0.1
-0.6
-0.4
phage
Bas21
-0.1
-0.0
+0.2
-0.6
-0.4
phage
CEV1
-0.0
-0.1
-0.2
-0.5
-0.2
phage
Bas31
+0.0
+0.1
+0.1
-0.6
-0.4
phage
RB51
+0.0
-0.1
-0.2
-0.3
-0.1
phage
K20
+0.0
-0.2
-0.5
+0.1
-0.1
phage
JK16
+0.1
+0.0
-0.1
-0.3
-0.3
phage
RB51
+0.2
-0.1
-0.1
-0.3
-0.1
phage
Bas48
+0.2
+0.0
-0.1
-0.4
-0.2
carbon source
D-Glucose
-0.4
+0.0
-0.2
-0.0
+0.2
phage
Bas04
+0.2
+0.0
-0.1
-0.3
-0.1
phage
Bas22
+0.3
-0.2
+0.1
-0.3
-0.2
carbon source
Sodium-DL-Lactate
-0.0
-0.1
-0.4
+0.2
+0.1
carbon source
L-Arabinose
-0.2
-0.3
+0.1
+0.2
-0.0
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