Private Fitness
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Escherichia coli Nissle 1917
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 30 experiments (either direction), sorted by average fitness
Or view
all 62 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
ECOLIN_RS24445 and ECOLIN_RS24450 are separated by 309 nucleotides
ECOLIN_RS24450 and ECOLIN_RS24455 are separated by 44 nucleotides
ECOLIN_RS24455 and ECOLIN_RS24460 are separated by 107 nucleotides
ECOLIN_RS24460 and ECOLIN_RS24465 are separated by 107 nucleotides
ECOLIN_RS24445: ECOLIN_RS24445 - FKBP-type peptidyl-prolyl cis-trans isomerase, at 4,910,912 to 4,911,532
_RS24445
ECOLIN_RS24450: ECOLIN_RS24450 - D-serine/D-alanine/glycine transporter, at 4,911,842 to 4,913,254
_RS24450
ECOLIN_RS24455: ECOLIN_RS24455 - iron-sulfur cluster repair protein YtfE, at 4,913,299 to 4,913,961
_RS24455
ECOLIN_RS24460: ECOLIN_RS24460 - DMT family transporter, at 4,914,069 to 4,915,034
_RS24460
ECOLIN_RS24465: ECOLIN_RS24465 - NAD(P)H:quinone oxidoreductase, at 4,915,142 to 4,916,002
_RS24465
Group
Condition
ECOLIN
_RS24445
ECOLIN
_RS24450
ECOLIN
_RS24455
ECOLIN
_RS24460
ECOLIN
_RS24465
phage
Bas44
-1.2
-0.1
-0.3
-0.4
-1.0
phage
Bas44
-0.1
-0.0
-0.3
-0.4
-0.6
phage
Bas45
+0.5
-0.0
-0.5
-0.5
-0.4
carbon source
D-Glucose
-0.9
+0.2
+0.1
+0.0
-0.4
phage
CEV1
-0.7
-0.2
+0.1
+0.1
-0.3
carbon source
Sodium-DL-Lactate
-0.6
-0.1
+0.2
-0.2
-0.0
phage
P1vir
-0.3
+0.0
+0.0
-0.3
-0.2
carbon source
L-Rhamnose
-0.9
+0.1
-0.1
+0.2
-0.0
phage
JK16
-0.2
+0.1
+0.1
-0.1
-0.5
phage
RB51
-0.3
+0.1
+0.1
-0.3
-0.1
phage
Bas31
-0.5
+0.1
-0.1
+0.1
-0.0
phage
Bas52
+0.1
+0.1
-0.2
-0.0
-0.4
phage
Bas04
-0.2
+0.2
+0.1
+0.0
-0.4
phage
Bas05
-0.5
+0.2
-0.0
+0.1
-0.1
no phage control
Control_Nissle
-0.1
+0.2
-0.2
+0.1
-0.2
phage
Bas04
-0.6
+0.1
+0.1
+0.2
+0.0
phage
TP7
+0.2
+0.1
+0.1
-0.1
-0.4
phage
Phi92
-0.4
+0.1
+0.3
+0.2
-0.3
no phage control
Control_Nissle
-0.0
+0.4
-0.2
+0.1
-0.3
phage
Bas05
+0.0
+0.1
+0.2
+0.1
-0.4
phage
K20
+0.1
+0.2
-0.1
+0.3
-0.3
phage
Bas48
+0.1
+0.4
-0.2
-0.0
-0.2
carbon source
L-Arabinose
+0.2
-0.1
+0.1
+0.3
-0.4
phage
K25
+0.1
+0.2
+0.2
-0.0
-0.4
phage
JK38
+0.3
+0.1
+0.1
-0.2
-0.2
carbon source
L-Arabinose
+0.2
+0.1
-0.3
+0.3
-0.0
phage
Bas38
+0.2
+0.4
+0.0
+0.1
-0.4
phage
Bas38
-0.0
+0.4
+0.2
+0.1
-0.3
carbon source
L-Rhamnose
+0.1
-0.1
+0.5
+0.3
-0.2
phage
RB68
+0.3
+0.6
-0.0
+0.2
+0.0
remove
ECOLIN_RS24445
plot
remove
ECOLIN_RS24450
plot
remove
ECOLIN_RS24455
remove
ECOLIN_RS24460
plot
remove
ECOLIN_RS24465
plot