Fitness for 5 genes in Escherichia coli Nissle 1917

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500 ntECOLIN_RS24445 and ECOLIN_RS24450 are separated by 309 nucleotidesECOLIN_RS24450 and ECOLIN_RS24455 are separated by 44 nucleotidesECOLIN_RS24455 and ECOLIN_RS24460 are separated by 107 nucleotidesECOLIN_RS24460 and ECOLIN_RS24465 are separated by 107 nucleotides ECOLIN_RS24445: ECOLIN_RS24445 - FKBP-type peptidyl-prolyl cis-trans isomerase, at 4,910,912 to 4,911,532 _RS24445 ECOLIN_RS24450: ECOLIN_RS24450 - D-serine/D-alanine/glycine transporter, at 4,911,842 to 4,913,254 _RS24450 ECOLIN_RS24455: ECOLIN_RS24455 - iron-sulfur cluster repair protein YtfE, at 4,913,299 to 4,913,961 _RS24455 ECOLIN_RS24460: ECOLIN_RS24460 - DMT family transporter, at 4,914,069 to 4,915,034 _RS24460 ECOLIN_RS24465: ECOLIN_RS24465 - NAD(P)H:quinone oxidoreductase, at 4,915,142 to 4,916,002 _RS24465
Group Condition ECOLIN_RS24445 ECOLIN_RS24450 ECOLIN_RS24455 ECOLIN_RS24460 ECOLIN_RS24465
phage Bas44 -1.2 -0.1 -0.3 -0.4 -1.0
phage Bas44 -0.1 -0.0 -0.3 -0.4 -0.6
phage Bas45 +0.5 -0.0 -0.5 -0.5 -0.4
carbon source D-Glucose -0.9 +0.2 +0.1 +0.0 -0.4
phage CEV1 -0.7 -0.2 +0.1 +0.1 -0.3
carbon source Sodium-DL-Lactate -0.6 -0.1 +0.2 -0.2 -0.0
phage P1vir -0.3 +0.0 +0.0 -0.3 -0.2
carbon source L-Rhamnose -0.9 +0.1 -0.1 +0.2 -0.0
phage JK16 -0.2 +0.1 +0.1 -0.1 -0.5
phage RB51 -0.3 +0.1 +0.1 -0.3 -0.1
phage Bas31 -0.5 +0.1 -0.1 +0.1 -0.0
phage Bas52 +0.1 +0.1 -0.2 -0.0 -0.4
phage Bas04 -0.2 +0.2 +0.1 +0.0 -0.4
phage Bas05 -0.5 +0.2 -0.0 +0.1 -0.1
no phage control Control_Nissle -0.1 +0.2 -0.2 +0.1 -0.2
phage Bas04 -0.6 +0.1 +0.1 +0.2 +0.0
phage TP7 +0.2 +0.1 +0.1 -0.1 -0.4
phage Phi92 -0.4 +0.1 +0.3 +0.2 -0.3
no phage control Control_Nissle -0.0 +0.4 -0.2 +0.1 -0.3
phage Bas05 +0.0 +0.1 +0.2 +0.1 -0.4
phage K20 +0.1 +0.2 -0.1 +0.3 -0.3
phage Bas48 +0.1 +0.4 -0.2 -0.0 -0.2
carbon source L-Arabinose +0.2 -0.1 +0.1 +0.3 -0.4
phage K25 +0.1 +0.2 +0.2 -0.0 -0.4
phage JK38 +0.3 +0.1 +0.1 -0.2 -0.2
carbon source L-Arabinose +0.2 +0.1 -0.3 +0.3 -0.0
phage Bas38 +0.2 +0.4 +0.0 +0.1 -0.4
phage Bas38 -0.0 +0.4 +0.2 +0.1 -0.3
carbon source L-Rhamnose +0.1 -0.1 +0.5 +0.3 -0.2
phage RB68 +0.3 +0.6 -0.0 +0.2 +0.0
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