Fitness for 5 genes in Escherichia coli Nissle 1917

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500 ntECOLIN_RS24265 and ECOLIN_RS24270 are separated by 90 nucleotidesECOLIN_RS24270 and ECOLIN_RS24275 are separated by 126 nucleotidesECOLIN_RS24275 and ECOLIN_RS24280 are separated by 18 nucleotidesECOLIN_RS24280 and ECOLIN_RS24285 are separated by 49 nucleotides ECOLIN_RS24265: ECOLIN_RS24265 - ribonuclease R, at 4,879,672 to 4,882,113 _RS24265 ECOLIN_RS24270: ECOLIN_RS24270 - 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB, at 4,882,204 to 4,882,935 _RS24270 ECOLIN_RS24275: ECOLIN_RS24275 - DUF2170 family protein, at 4,883,062 to 4,883,463 _RS24275 ECOLIN_RS24280: ECOLIN_RS24280 - PspA/IM30 family protein, at 4,883,482 to 4,884,180 _RS24280 ECOLIN_RS24285: ECOLIN_RS24285 - YjfK family protein, at 4,884,230 to 4,884,889 _RS24285
Group Condition ECOLIN_RS24265 ECOLIN_RS24270 ECOLIN_RS24275 ECOLIN_RS24280 ECOLIN_RS24285
carbon source L-Rhamnose -0.5 -1.9 N.D. N.D. -0.4
phage Bas31 -0.6 -2.5 N.D. N.D. +0.3
phage Bas31 -0.7 -1.7 N.D. N.D. -0.0
phage EV219 -0.7 -1.4 N.D. N.D. -0.2
phage K25 -0.3 -1.6 N.D. N.D. -0.3
phage CEV1 -0.5 -1.5 N.D. N.D. +0.0
phage Bas38 -0.7 -1.0 N.D. N.D. -0.2
phage Bas21 -0.2 -1.4 N.D. N.D. -0.2
phage Bas37 -0.6 -0.9 N.D. N.D. -0.3
phage TP7 -0.3 -1.7 N.D. N.D. +0.2
phage Phi92 -0.3 -1.2 N.D. N.D. -0.3
phage Bas63 -0.2 -1.2 N.D. N.D. -0.3
phage Phi92 -0.2 -1.4 N.D. N.D. -0.0
phage TP7 -0.9 -0.8 N.D. N.D. +0.2
phage Bas27 -0.5 -1.1 N.D. N.D. +0.2
phage Bas68 -0.5 -0.8 N.D. N.D. -0.2
phage Bas22 -0.3 -0.7 N.D. N.D. -0.4
phage Bas05 -0.3 -0.6 N.D. N.D. -0.3
phage Bas27 -0.4 -0.8 N.D. N.D. +0.1
phage Bas38 -0.5 -0.5 N.D. N.D. -0.0
no phage control Control_Nissle -0.2 -1.0 N.D. N.D. +0.2
phage Bas21 -0.4 -0.8 N.D. N.D. +0.1
phage Bas52 -0.1 -0.6 N.D. N.D. -0.3
phage K20 -0.4 -0.9 N.D. N.D. +0.3
phage K20 -0.2 -0.8 N.D. N.D. +0.1
phage Bas48 -0.6 -0.4 N.D. N.D. +0.3
phage JK38 -0.6 -0.3 N.D. N.D. +0.3
phage Bas45 -0.2 -0.8 N.D. N.D. +0.5
carbon source L-Arabinose +0.6 -0.7 N.D. N.D. +0.2
carbon source Casamino-acids -0.3 +0.5 N.D. N.D. +0.4
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